RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PRAMEF1O95521 474 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 RARBP10826 455 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ADH6P28332 368 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ADH7P40394 386 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 TDO2P48775 406 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 CCT2P78371 535 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 HTRA4P83105 476 aaPredicted RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 EFR3AQ14156 821 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ASIC2Q16515 512 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ADCK5Q3MIX3 580 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 FAM26FQ5R3K3 315 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ZBTB41Q5SVQ8 909 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 GJC2Q5T442 439 aaPredicted RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 CWF19L1Q69YN2 538 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 RPUSD3Q6P087 351 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 MFSD6Q6ZSS7 791 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 B4GALNT4Q76KP1 1039 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 CDH24Q86UP0 819 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 TEX9Q8N6V9 391 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 FANCBQ8NB91 859 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 FAM71BQ8TC56 605 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 STYXQ8WUJ0 223 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ZFPM2Q8WW38 1151 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 SLC35A4Q96G79 324 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 JAKMIP1Q96N16 626 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 PDCD2LQ9BRP1 358 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 BRIP1Q9BX63 1249 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 JAM3Q9BX67 310 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 PAIP1Q9H074 479 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 KCTD10Q9H3F6 313 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ZWILCHQ9H900 591 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 KCND1Q9NSA2 647 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ZHX1Q9UKY1 873 aaPredicted RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 MAFFQ9ULX9 164 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 PA2G4Q9UQ80 394 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 SH3BP1Q9Y3L3 701 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ZNF711Q9Y462 761 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ATP23Q9Y6H3 246 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 PRSS38A1L453 326 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 RBAK-RBAKDNI3L0D1 243 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 MAN2B1O00754 1011 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 CLGNO14967 610 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 HNRNPDLO14979 420 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 LRIG2O94898 1065 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 CLTBP09497 229 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 EPXP11678 715 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 JUPP14923 745 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 AOAHP28039 575 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ATP6V1E1P36543 226 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 PAPOLAP51003 745 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 SUMO3P55854 103 aaPredicted RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 VAMP2P63027 116 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 NKX6-1P78426 367 aaPredicted RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 CDK17Q00537 523 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 UBE3AQ05086 875 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 KCNMA1Q12791 1236 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 TUSC3Q13454 348 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 CYP4F22Q6NT55 531 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 LETMD1Q6P1Q0 360 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 SLCO4C1Q6ZQN7 724 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ESPNLQ6ZVH7 1005 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 WAPLQ7Z5K2 1190 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 KSR1Q8IVT5 923 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 KLHL23Q8NBE8 558 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 IPO4Q8TEX9 1081 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 ST8SIA4Q92187 359 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 DLG3Q92796 817 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 CHAMP1Q96JM3 812 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ACE2Q9BYF1 805 aaPredicted RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 ATXN3LQ9H3M9 355 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 POFUT1Q9H488 388 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 STK32BQ9NY57 414 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 IGSF9Q9P2J2 1179 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 MTRRQ9UBK8 725 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 SEL1LQ9UBV2 794 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 ADD3Q9UEY8 706 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 SCAF8Q9UPN6 1271 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 MAN2B2Q9Y2E5 1009 aa4.54□□□□□ -1.68
SKP1-209ENST00000522552 RRP7AQ9Y3A4 280 aaKnown RBP4.54□□□□□ -1.68
SKP1-209ENST00000522552 CNTNAP5Q8WYK1 1306 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 C17orf113A0A1B0GUU1 675 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 LRRC14BA6NHZ5 514 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 ELL2O00472 640 aaPredicted RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 PODXLO00592 558 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 SLC16A6O15403 523 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 PTP4A3O75365 173 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 FAM155BO75949 473 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 FSBPO95073 299 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 PORP16435 677 aaPredicted RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 ALAS2P22557 587 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 KIF5BP33176 963 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 MRE11P49959 708 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 SEC24CP53992 1094 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 LGALS4P56470 323 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 RNASE9P60153 205 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 ARF3P61204 181 aaPredicted RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 SNRPNP63162 240 aaKnown RBP4.53□□□□□ -1.68
SKP1-209ENST00000522552 TMF1P82094 1093 aa4.53□□□□□ -1.68
SKP1-209ENST00000522552 ARF1P84077 181 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms