RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SNX24Q9Y343 169 aa12.85□□□□□ -0.35
SPIDR-217ENST00000522117 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 KIAA0391O15091 583 aaKnown RBP12.84□□□□□ -0.35
SPIDR-217ENST00000522117 SPTLC1O15269 473 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 GSC2O15499 205 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 RXRGP48443 463 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 NEK2P51955 445 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 CDC16Q13042 620 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 HNRNPDQ14103 355 aaKnown RBP12.84□□□□□ -0.35
SPIDR-217ENST00000522117 LONRF1Q17RB8 773 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 STXBP5LQ9Y2K9 1186 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 NUMBLQ9Y6R0 609 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 WNK3Q9BYP7 1800 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 NEURL1BA8MQ27 555 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 DR1Q01658 176 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 NAALADL2Q58DX5 795 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 CEP70Q8NHQ1 597 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 ROPN1BQ9BZX4 212 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-217ENST00000522117 ROPN1Q9HAT0 212 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-217ENST00000522117 LGR6Q9HBX8 967 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 PFASO15067 1338 aa12.84□□□□□ -0.35
SPIDR-217ENST00000522117 PTENP60484 403 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 PFKPQ01813 784 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 GCKRQ14397 625 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 VPS37AQ8NEZ2 397 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 C10orf82Q8WW14 230 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 STMN2Q93045 179 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 EDEM3Q9BZQ6 932 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 RBM38Q9H0Z9 239 aaKnown RBP12.83□□□□□ -0.35
SPIDR-217ENST00000522117 COMMD10Q9Y6G5 202 aa12.83□□□□□ -0.35
SPIDR-217ENST00000522117 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 BICDL2A1A5D9 508 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 FBP2O00757 339 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 ADAM23O75077 832 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 ZFYP08048 801 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-217ENST00000522117 SMIM18P0DKX4 95 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 CPA3P15088 417 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 LIFRP42702 1097 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 KIAA1755Q5JYT7 1200 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 TTC38Q5R3I4 469 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 PATL1Q86TB9 770 aaKnown RBP12.83□□□□□ -0.36
SPIDR-217ENST00000522117 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-217ENST00000522117 GLG1Q92896 1179 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 PPP1R10Q96QC0 940 aaKnown RBP12.83□□□□□ -0.36
SPIDR-217ENST00000522117 BTBD10Q9BSF8 475 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 SAR1AQ9NR31 198 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 ANGPTL2Q9UKU9 493 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
SPIDR-217ENST00000522117 SIPA1L3O60292 1781 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-217ENST00000522117 OXSR1O95747 527 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 BRAFP15056 766 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 PCSK6P29122 969 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 DRG2P55039 364 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 SPIDRQ14159 915 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 C1orf228Q6PIY5 440 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 FAM186BQ8IYM0 893 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 TCP11L1Q9NUJ3 509 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 SAP30BPQ9UHR5 308 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 TELO2Q9Y4R8 837 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 MAGEB2O15479 319 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 HNRNPCL1O60812 293 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 ANPEPP15144 967 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 AMPD1P23109 780 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 HOXD10P28358 340 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 ACADVLP49748 655 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 THOC5Q13769 683 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 ZNF568Q3ZCX4 644 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 SYN2Q92777 582 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 GFM2Q969S9 779 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 PHTF1Q9UMS5 762 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 FAM187AA6NFU0 413 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 GPAA1O43292 621 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 NOL4O94818 638 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 PGM3O95394 542 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 FGFR1OPO95684 399 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 KRT2P35908 639 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 ZNF132P52740 706 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 AIMP1Q12904 312 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 RTN1Q16799 776 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 EXOC3L4Q17RC7 722 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 JAMLQ86YT9 394 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 TNFRSF25Q93038 417 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 PTCD3Q96EY7 689 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 SERPINB12Q96P63 405 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 ERVK-5Q9HDB9 667 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 MAP3K20Q9NYL2 800 aaKnown RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 SEL1LQ9UBV2 794 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 ZFP69BQ9UJL9 534 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 TTC7AQ9ULT0 858 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-217ENST00000522117 STX8Q9UNK0 236 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
SPIDR-217ENST00000522117 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms