RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 LEFTY2O00292 366 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 AKR1B10O60218 316 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 HMGA2P52926 109 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 ERVK-21P61565 698 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 FAM189BP81408 668 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 MRPS9P82933 396 aaKnown RBP4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 PPP3CAQ08209 521 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 VPS72Q15906 364 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 MST1LQ2TV78 715 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 BTNL9Q6UXG8 535 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 ZNF662Q6ZS27 426 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 Q6ZVL8 140 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 DOK3Q7L591 496 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 ZNF627Q7L945 461 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 GPRIN1Q7Z2K8 1008 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 FAM83AQ86UY5 434 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 DDX42Q86XP3 938 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 SYT12Q8IV01 421 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 TRIM8Q9BZR9 551 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 NRDE2Q9H7Z3 1164 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 IFT122Q9HBG6 1241 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 DNAJC28Q9NX36 388 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 SCOCQ9UIL1 159 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 PRKAB1Q9Y478 270 aa4.74□□□□□ -1.65
HMGB1P29-201ENST00000505659 RPTORQ8N122 1335 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 AHRRA9YTQ3 701 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 SCAF4O95104 1147 aaKnown RBP4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 CPEP16870 476 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 MCM7P33993 719 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 TRMT2AQ8IZ69 625 aaKnown RBP4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 ZNF276Q8N554 614 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 SLC35B2Q8TB61 432 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 SLC25A43Q8WUT9 341 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 SLC2A13Q96QE2 648 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 PDCD2LQ9BRP1 358 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 TEX101Q9BY14 249 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 ACE2Q9BYF1 805 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 KCNH6Q9H252 994 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 LDAHQ9H6V9 325 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 SPON1Q9HCB6 807 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 EIF2B4Q9UI10 523 aaKnown RBP4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 HDAC5Q9UQL6 1122 aa4.73□□□□□ -1.65
HMGB1P29-201ENST00000505659 PRR5-ARHGAP8B1AHC4 643 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 ADH4P08319 380 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 PTPN7P35236 360 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 MTNR1BP49286 362 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 RNF219Q5W0B1 726 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 Q6ZPA2 131 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 OR10H5Q8NGA6 315 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 HOXB13Q92826 284 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 NDC1Q9BTX1 674 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 MLST8Q9BVC4 326 aa4.72□□□□□ -1.65
HMGB1P29-201ENST00000505659 PHLDB1Q86UU1 1377 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 SBNO2Q9Y2G9 1366 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 HSP90B1P14625 803 aaKnown RBP4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 KRT4P19013 534 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 MAKP20794 623 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 IARSP41252 1262 aaKnown RBP4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 RNASE9P60153 205 aaKnown RBP4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 SEPT2Q15019 361 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 MRGPREQ86SM8 312 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 LDLRAD3Q86YD5 345 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 CNTD1Q8N815 330 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 GPR156Q8NFN8 814 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 OR2I1PQ8NGU4 316 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 STON2Q8WXE9 905 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 TFAP2CQ92754 450 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 NEU1Q99519 415 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 SPC25Q9HBM1 224 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 TRPM5Q9NZQ8 1165 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 PCDHGA2Q9Y5H1 932 aa4.71□□□□□ -1.66
HMGB1P29-201ENST00000505659 ATRNL1Q5VV63 1379 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 TBKBP1A7MCY6 615 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 CXorf49A8MYA2 514 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 B5MCH6 92 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 TRIM24O15164 1050 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 ZNF185O15231 689 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 LPXNO60711 386 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 PEX11BO96011 259 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 GASTP01350 101 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 MTHFD2P13995 350 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 FPR1P21462 350 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 ECHS1P30084 290 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 CRHR1P34998 444 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 SREBF1P36956 1147 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 CDKN1CP49918 316 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 NHLH2Q02577 135 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 MALLQ13021 153 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 KLF1Q13351 362 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 NOMO1Q15155 1222 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 MUM1L1Q5H9M0 696 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 METTL24Q5JXM2 366 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 MBNL2Q5VZF2 373 aaKnown RBP4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 RHOUQ7L0Q8 258 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 PQLC1Q8N2U9 271 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 CBARPQ8N350 705 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 OR7D4Q8NG98 312 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 FATE1Q969F0 183 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 IKZF4Q9H2S9 585 aa4.7□□□□□ -1.66
HMGB1P29-201ENST00000505659 GREM2Q9H772 168 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms