RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SGSM1Q2NKQ1 1148 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 SGO2Q562F6 1265 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 RNF207Q6ZRF8 634 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 GSTA5Q7RTV2 222 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-208ENST00000504387 FAM186BQ8IYM0 893 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 RASGEF1CQ8N431 466 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 HIPK4Q8NE63 616 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 WDR66Q8TBY9 1149 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 LRRC8CQ8TDW0 803 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 STK32AQ8WU08 396 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 SLC35C1Q96A29 364 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 PRR11Q96HE9 360 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-208ENST00000504387 TXLNGYQ9BZA5 131 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 TAOK3Q9H2K8 898 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 PHTF1Q9UMS5 762 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 TJP1Q07157 1748 aa8.15□□□□□ -1.1
NEDD9-208ENST00000504387 SRRM3A6NNA2 597 aaPredicted RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 CAPN9O14815 690 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 PHF2O75151 1096 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 LUC7L3O95232 432 aaKnown RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 NUDT17P0C025 328 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 KCNA3P22001 575 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 CA4P22748 312 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 SP100P23497 879 aaPredicted RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 HOXA13P31271 388 aaPredicted RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 PTGIRP43119 386 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 PSMC4P43686 418 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 RRP1BQ14684 758 aaKnown RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 EPHA7Q15375 998 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 SHROOM1Q2M3G4 852 aaPredicted RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 GALNTL6Q49A17 601 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 TPH2Q8IWU9 490 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 RPUSD2Q8IZ73 545 aaKnown RBP8.15□□□□□ -1.11
NEDD9-208ENST00000504387 SYCP3Q8IZU3 236 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 SLC5A5Q92911 643 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 FGD4Q96M96 766 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 CEP63Q96MT8 703 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 TTC1Q99614 292 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 NMRK1Q9NWW6 199 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 ARMCX1Q9P291 453 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 ZBTB21Q9ULJ3 1066 aa8.15□□□□□ -1.11
NEDD9-208ENST00000504387 GOLGA8IPA6NC78 632 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 A6NHS1 94 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 GOLGA8JA6NMD2 632 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 DDX39AO00148 427 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 TBCAO75347 108 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 STK10O94804 968 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ECEL1O95672 775 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ZBTB48P10074 688 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 AKR1B1P15121 316 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 VCAM1P19320 739 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 SOX5P35711 763 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 COILP38432 576 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 PIK3CAP42336 1068 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 GCLMP48507 274 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 GSTO1P78417 241 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 TSNAXIP1Q2TAA8 658 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 CWF19L1Q69YN2 538 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 CATSPER3Q86XQ3 398 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 UBL4BQ8N7F7 174 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 SCG3Q8WXD2 468 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 RAB3IPQ96QF0 476 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 PSTPIP2Q9H939 334 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 VPS37BQ9H9H4 285 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 TMEM165Q9HC07 324 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 SIX2Q9NPC8 291 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 LNPEPQ9UIQ6 1025 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 UTRNP46939 3433 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 KAT6AQ92794 2004 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 NVLO15381 856 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 GNA14O95837 355 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ZSCAN5DPP0CG00 497 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 TAC1P20366 129 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 WDR4P57081 412 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 DLG4P78352 724 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 SEPT7Q16181 437 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 CFAP157Q5JU67 520 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 SNX30Q5VWJ9 437 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ANKMY2Q8IV38 441 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 ZSWIM2Q8NEG5 633 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 CKAP2Q8WWK9 683 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 EZH1Q92800 747 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 UBE2OQ9C0C9 1292 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 NYXQ9GZU5 481 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 DHX36Q9H2U1 1008 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 C10orf88Q9H8K7 445 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 PCMTD2Q9NV79 361 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 RHBDL2Q9NX52 303 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 BZW2Q9Y6E2 419 aaKnown RBP8.14□□□□□ -1.11
NEDD9-208ENST00000504387 TNS2Q63HR2 1409 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 A0A1W2PPM1 405 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 O00370 1275 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 EXOC3O60645 756 aa8.14□□□□□ -1.11
NEDD9-208ENST00000504387 RARGP13631 454 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms