RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 ECHDC2Q86YB7 292 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 RAD54LQ92698 747 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 FGD4Q96M96 766 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 TGS1Q96RS0 853 aaKnown RBP12.8□□□□□ -0.36
TP53-208ENST00000504290 FAM192AQ9GZU8 254 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 SNED1Q8TER0 1413 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 PYGLP06737 847 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 PTGIRP43119 386 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 RHBDL3P58872 404 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 KCNH2Q12809 1159 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 MUM1Q2TAK8 710 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 TMEM259Q4ZIN3 620 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 VSIG1Q86XK7 387 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 ANKLE1Q8NAG6 615 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 MGARPQ8TDB4 240 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 PNMA5Q96PV4 448 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 STOML1Q9UBI4 398 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 PCYOX1Q9UHG3 505 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 PHF2O75151 1096 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 RPL21P46778 160 aaKnown RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 CDK8P49336 464 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 YARSP54577 528 aaKnown RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 POLE2P56282 527 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 KCTD19Q17RG1 926 aaPredicted RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 SPDYAQ5MJ70 313 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 SOGA3Q5TF21 947 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 RNF220Q5VTB9 566 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 DCAF12L1Q5VU92 463 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 DPY19L2P1Q6NXN4 242 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 HEATR3Q7Z4Q2 680 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 ZC3H3Q8IXZ2 948 aaKnown RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 ZNF333Q96JL9 665 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 DDX23Q9BUQ8 820 aaKnown RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 RAB34Q9BZG1 259 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 DMAP1Q9NPF5 467 aaPredicted RBP12.79□□□□□ -0.36
TP53-208ENST00000504290 USP20Q9Y2K6 914 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
TP53-208ENST00000504290 TNS1Q9HBL0 1735 aaKnown RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 NVLO15381 856 aaKnown RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 ECE2O60344 883 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 SKIP12755 728 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 FGFR4P22455 802 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 VHLP40337 213 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 POLGP54098 1239 aaPredicted RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 SLC4A8Q2Y0W8 1093 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 CGB2Q6NT52 195 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 GLIS3Q8NEA6 775 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 MAIP1Q8WWC4 291 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 RFFLQ8WZ73 363 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 EYA3Q99504 573 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 ZC3H12CQ9C0D7 883 aaKnown RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 LMCD1Q9NZU5 365 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 NCANO14594 1321 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 G3V3G9 751 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 APBA3O96018 575 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 IMPDH2P12268 514 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 GM2AP17900 193 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 STX2P32856 288 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 RANBP1P43487 201 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 PSMC4P43686 418 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
TP53-208ENST00000504290 GTF2IP78347 998 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 PPATQ06203 517 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 COASYQ13057 564 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 ZRSR2Q15696 482 aaKnown RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 TMEM266Q2M3C6 531 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 ZNF568Q3ZCX4 644 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 FAM26FQ5R3K3 315 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 CYFIP1Q7L576 1253 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 UHMK1Q8TAS1 419 aaKnown RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 ART4Q93070 314 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 MYLK2Q9H1R3 596 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 PCMTD2Q9NV79 361 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
TP53-208ENST00000504290 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 DAGLAQ9Y4D2 1042 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 PCDHA3Q9Y5H8 950 aa12.78□□□□□ -0.36
TP53-208ENST00000504290 USP17L3A6NCW0 530 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 USP17L4A6NCW7 530 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 MAPK13O15264 365 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 KRT13P13646 458 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 TXKP42681 527 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.36
TP53-208ENST00000504290 GALCP54803 685 aa12.77□□□□□ -0.36
TP53-208ENST00000504290 OCRLQ01968 901 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms