RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CFAP73A6NFT4 308 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 GNGT2O14610 69 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 KRT7P08729 469 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 ZNF746Q6NUN9 644 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 VPS39Q96JC1 886 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 TTC1Q99614 292 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 FER1L4A9Z1Z3 1794 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 UBE4BO95155 1302 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 FDPSP14324 419 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 ST13P4Q8IZP2 240 aaPredicted RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 GRAMD1AQ96CP6 724 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 UPF3AQ9H1J1 476 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 GYS1P13807 737 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 BEST2Q8NFU1 509 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 TGS1Q96RS0 853 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 AMACRQ9UHK6 382 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 G3BP2Q9UN86 482 aaKnown RBP17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 ORC6Q9Y5N6 252 aa17.18■□□□□ 0.34
HMGXB3-202ENST00000503427 FAM205CA6NFA0 338 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 TRPA1O75762 1119 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 DNAJC8O75937 253 aaPredicted RBP17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 HAUS5O94927 633 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 DEUP1Q05D60 604 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 FSCBQ5H9T9 825 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 EZH2Q15910 746 aaKnown RBP17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 RHPN2Q8IUC4 686 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 RNF139Q8WU17 664 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 PFDN1O60925 122 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 PPP1R37O75864 691 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 KRT14P02533 472 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 FGFR2P21802 821 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 YWHABP31946 246 aaKnown RBP17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 POLE2P56282 527 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 KYAT1Q16773 422 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 GRAMD1BQ3KR37 738 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 GPD1LQ8N335 351 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 AGPAT1Q99943 283 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 DDX56Q9NY93 547 aaKnown RBP17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 NWD1Q149M9 1564 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 EMSYQ7Z589 1322 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 FOXP2O15409 715 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 TRIM49P0CI25 452 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 TRIM49CP0CI26 452 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 GNA15P30679 374 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 CYP2C19P33261 490 aa17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 MYLK4Q86YV6 388 aaPredicted RBP17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 TTC7AQ9ULT0 858 aaPredicted RBP17.17■□□□□ 0.34
HMGXB3-202ENST00000503427 XKR3Q5GH77 459 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 CCNI2Q6ZMN8 369 aaPredicted RBP17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 CLEC10AQ8IUN9 316 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 DGAT1O75907 488 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 BYSLQ13895 437 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 RAD9BQ6WBX8 426 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 JMJD4Q9H9V9 463 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 PPFIA2O75334 1257 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 TMCO4Q5TGY1 634 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 FBXL13Q8NEE6 735 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 CENPKQ9BS16 269 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 TAF6LQ9Y6J9 622 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 KPNA7A9QM74 516 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 ZNF185O15231 689 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 TAC1P20366 129 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 TROAPQ12815 778 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 GPS1Q13098 491 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 DRP2Q13474 957 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 BAATQ14032 418 aaPredicted RBP17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 TWF2Q6IBS0 349 aaKnown RBP17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 RGL1Q9NZL6 768 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 HPS5Q9UPZ3 1129 aa17.16■□□□□ 0.34
HMGXB3-202ENST00000503427 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 STAT5BP51692 787 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 ATP11CQ8NB49 1132 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 GCOM2Q9BZD3 368 aaPredicted RBP17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 PRKAG2Q9UGJ0 569 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 HUS1O60921 280 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 RTN2O75298 545 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 PHEXP78562 749 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 LRIG3Q6UXM1 1119 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 TRIM67Q6ZTA4 783 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 ENGASEQ8NFI3 743 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 CCDC138Q96M89 665 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 CYTH2Q99418 400 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 SENP2Q9HC62 589 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 MLXIPLQ9NP71 852 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 H0Y3Z8 333 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 GOLGA8MH3BSY2 632 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 CHEK2O96017 543 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 DPEP1P16444 411 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 MDH1P40925 334 aaKnown RBP17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 PAMP19021 973 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 IL1RL1Q01638 556 aa17.15■□□□□ 0.34
HMGXB3-202ENST00000503427 GUCY1A3Q02108 690 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms