RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 CENPVL1A0A0U1RR11 272 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 RASSF10A6NK89 507 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 GOLGA8BA8MQT2 603 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 PRKD3O94806 890 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 LSP1P33241 339 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 BMPR1AP36894 532 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 SESN3P58005 492 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 EXOSC10Q01780 885 aaKnown RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 ALDH6A1Q02252 535 aaKnown RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 MTMR1Q13613 665 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 SPIDRQ14159 915 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 TERF2Q15554 542 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 DGKDQ16760 1214 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 PLEKHG6Q3KR16 790 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 ESRP1Q6NXG1 681 aaKnown RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 ZZZ3Q8IYH5 903 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 CMTM4Q8IZR5 234 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 CNTD1Q8N815 330 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 PLA2G15Q8NCC3 412 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 CLRN3Q8NCR9 226 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 HIPK4Q8NE63 616 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 SCARB1Q8WTV0 552 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 RTF1Q92541 710 aaKnown RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 ERCC4Q92889 916 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 MTMR8Q96EF0 704 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 RPL10LQ96L21 214 aaKnown RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 HAPLN2Q9GZV7 340 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 CCDC8Q9H0W5 538 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 MS4A5Q9H3V2 200 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 ZMAT4Q9H898 229 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 DKK2Q9UBU2 259 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 FRMD4BQ9Y2L6 1034 aa3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 NOC2LQ9Y3T9 749 aaKnown RBP3.31□□□□□ -1.88
HMGB1P35-201ENST00000503360 COL3A1P02461 1466 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 SPATA31A6Q5VVP1 1343 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 PRAMEF22A3QJZ6 481 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 LCHNA4D1U4 455 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 ONECUT2O95948 504 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 GNAT2P19087 354 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 CD40P25942 277 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 FNTBP49356 437 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 PHC1P78364 1004 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 FAPQ12884 760 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 FOXF2Q12947 444 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 LRRC32Q14392 662 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 EPHA7Q15375 998 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 GPR158Q5T848 1215 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 CCDC62Q6P9F0 684 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 C1QL2Q7Z5L3 287 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 RASSF3Q86WH2 238 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 SRRM1Q8IYB3 904 aaKnown RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 ELOA2Q8IYF1 753 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 Q8N9P0 234 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 ZNF610Q8N9Z0 462 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 SMG7Q92540 1137 aaKnown RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 AHCYL2Q96HN2 611 aaKnown RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 DCLRE1CQ96SD1 692 aaKnown RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 SMAD5Q99717 465 aaKnown RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 C1QTNF7Q9BXJ2 289 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 ASPSCR1Q9BZE9 553 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 KCNH6Q9H252 994 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 ALG13Q9NP73 1137 aaKnown RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 TOPORSQ9NS56 1045 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 KCMF1Q9P0J7 381 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 RCAN3Q9UKA8 241 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 TRHDEQ9UKU6 1024 aa3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 EPN1Q9Y6I3 576 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P35-201ENST00000503360 KDM1AO60341 852 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 TOX4O94842 621 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 S100BP04271 92 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 HKR1P10072 659 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 SEC24CP53992 1094 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 ADCY1Q08828 1119 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 ODR4Q5SWX8 454 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 SYDE2Q5VT97 1194 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 FRMD7Q6ZUT3 714 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 BMP8AQ7Z5Y6 402 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 RTN4RL1Q86UN2 441 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 CXorf67Q86X51 503 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 NME9Q86XW9 330 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 CMIPQ8IY22 773 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 SIMC1Q8NDZ2 872 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 OR5AN1Q8NGI8 311 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 CPT1CQ8TCG5 803 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 FOXRED1Q96CU9 486 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 ZNF496Q96IT1 587 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 LRFN3Q9BTN0 628 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 C14orf93Q9H972 538 aaKnown RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 C14orf119Q9NWQ9 140 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 KLHL42Q9P2K6 505 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 MSRAQ9UJ68 235 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 G3BP2Q9UN86 482 aaKnown RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 SORCS3Q9UPU3 1222 aa3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 RBM8AQ9Y5S9 174 aaKnown RBP3.29□□□□□ -1.88
HMGB1P35-201ENST00000503360 UBA6A0AVT1 1052 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 GOLGA8AA7E2F4 631 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 AHRRA9YTQ3 701 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 DIRC3C9JPN6 131 aa3.28□□□□□ -1.88
HMGB1P35-201ENST00000503360 K7ESF4 209 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms