RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 METTL14Q9HCE5 456 aaKnown RBP6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 LANCL2Q9NS86 450 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 SMPD4Q9NXE4 827 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 ST6GALNAC2Q9UJ37 374 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 ANKRD6Q9Y2G4 727 aa6.4□□□□□ -1.38
HMGB1P38-201ENST00000490557 CAPN14A8MX76 684 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 IPO13O94829 963 aaKnown RBP6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 HSP90B1P14625 803 aaKnown RBP6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 RAB27AP51159 221 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 DUSP8Q13202 625 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 ICAM4Q14773 271 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 ELAVL1Q15717 326 aaKnown RBP6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 PPP4R3AQ6IN85 833 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 ZNF585AQ6P3V2 769 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 GSPT2Q8IYD1 628 aaKnown RBP6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 CMTR2Q8IYT2 770 aaKnown RBP6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 ANKRD35Q8N283 1001 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 Q8TCH9 128 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 SSBP3Q9BWW4 388 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 TRPS1Q9UHF7 1281 aa6.39□□□□□ -1.39
HMGB1P38-201ENST00000490557 CYP27B1O15528 508 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 ADCY6O43306 1168 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 HOXA3O43365 443 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 AKAP10O43572 662 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 HMGB1P09429 215 aaKnown RBP6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 PF4V1P10720 104 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 IL2RBP14784 551 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 ZSCAN20P17040 1043 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 ACO1P21399 889 aaKnown RBP6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 SELENOPP49908 381 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 MRPL49Q13405 166 aaKnown RBP6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 FAM214AQ32MH5 1076 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 PRAMEF14Q5SWL7 426 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 Q6ZVL8 140 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 RSPH3Q86UC2 560 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 TTC9BQ8N6N2 239 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 CCHCR1Q8TD31 782 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 CYFIP2Q96F07 1278 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 C8orf49Q96NF6 230 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 ADOQ96SZ5 270 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 CPPED1Q9BRF8 314 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 TDP1Q9NUW8 608 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 MOCS1Q9NZB8 636 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 ZIM2Q9NZV7 527 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 SH3BP1Q9Y3L3 701 aa6.38□□□□□ -1.39
HMGB1P38-201ENST00000490557 CCDC154A6NI56 674 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 SREBF1P36956 1147 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 PTH1RQ03431 593 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 PPP2R5AQ15172 486 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 APBB1IPQ7Z5R6 666 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 FAM83AQ86UY5 434 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 ELOA2Q8IYF1 753 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 MB21D1Q8N884 522 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 REPS2Q8NFH8 660 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 DNERQ8NFT8 737 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 FBXO18Q8NFZ0 1043 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 JPH3Q8WXH2 748 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 COA7Q96BR5 231 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 MIEF2Q96C03 454 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 PDCD2LQ9BRP1 358 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 LDAHQ9H6V9 325 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 AJAP1Q9UKB5 411 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 THRAP3Q9Y2W1 955 aaKnown RBP6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 EID1Q9Y6B2 187 aa6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 ARID1BQ8NFD5 2236 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P38-201ENST00000490557 ZMYM3Q14202 1370 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 PRR5-ARHGAP8B1AHC4 643 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 TEX33O43247 280 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 HTRA2O43464 458 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 STC2O76061 302 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 ABLIM3O94929 683 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 RAP2AP10114 183 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 HIBADHP31937 336 aaKnown RBP6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 WASP42768 502 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 CRHR2Q13324 411 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 SEPT2Q15019 361 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 ATP2B3Q16720 1220 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 TRMT2AQ8IZ69 625 aaKnown RBP6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 STON2Q8WXE9 905 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 ST8SIA2Q92186 375 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 CDK5RAP1Q96SZ6 601 aaKnown RBP6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 NUP88Q99567 741 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 ENKD1Q9H0I2 346 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 TCF7L1Q9HCS4 588 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 LIMCH1Q9UPQ0 1083 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 PCDHA13Q9Y5I0 950 aa6.36□□□□□ -1.39
HMGB1P38-201ENST00000490557 B5MCH6 92 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 GPR32O75388 356 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 ZRANB2O95218 330 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 MAGEA10P43363 369 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 FLT3LGP49771 235 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 SP140Q13342 867 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 PRKD1Q15139 912 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 CHPFQ8IZ52 775 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 ZNF808Q8N4W9 903 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 LILRA3Q8N6C8 439 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 OR2I1PQ8NGU4 316 aa6.35□□□□□ -1.39
HMGB1P38-201ENST00000490557 ATXN2LQ8WWM7 1075 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms