RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 A0A0B4J269 797 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 TGFB1I1O43294 461 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 HOXA2O43364 376 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 GARTP22102 1010 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 MORC3Q14149 939 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 NOLC1Q14978 699 aaKnown RBP eCLIP21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 LRIT3Q3SXY7 679 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 RBM43Q6ZSC3 357 aaKnown RBP21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 ZNF689Q96CS4 500 aaPredicted RBP21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 HAPLN2Q9GZV7 340 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 CGNQ9P2M7 1197 aaKnown RBP21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 ZMYM2Q9UBW7 1377 aa21.19■□□□□ 0.98
PCOLCE-208ENST00000487172 ITGA4P13612 1032 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 ADSSP30520 456 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 PPP1R2P41236 205 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 GRM5P41594 1212 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 KYAT1Q16773 422 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 KLHL40Q2TBA0 621 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 AGMOQ6ZNB7 445 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 TMCO2Q7Z6W1 182 aaPredicted RBP21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 RAD9AQ99638 391 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 IKZF4Q9H2S9 585 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 KCTD10Q9H3F6 313 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 RC3H2Q9HBD1 1191 aaKnown RBP21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 RNF19AQ9NV58 838 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 ANKFY1Q9P2R3 1169 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 GIT1Q9Y2X7 761 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 INSL6Q9Y581 213 aa21.18■□□□□ 0.98
PCOLCE-208ENST00000487172 PDXKO00764 312 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 KIAA0391O15091 583 aaKnown RBP21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 SMAD3P84022 425 aaKnown RBP21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 CCDC183Q5T5S1 534 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 FAM109BQ6ICB4 259 aaPredicted RBP21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 HS2ST1Q7LGA3 356 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 ZBTB33Q86T24 672 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 NELFCDQ8IXH7 590 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 GOLGA5Q8TBA6 731 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 TMEM174Q8WUU8 243 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 ZBED2Q9BTP6 218 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 RNF39Q9H2S5 420 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 NXF3Q9H4D5 531 aaKnown RBP21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 SNTG2Q9NY99 539 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 HES2Q9Y543 173 aa21.17■□□□□ 0.98
PCOLCE-208ENST00000487172 MEIS3P2A8K0S8 358 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 GRXCR1A8MXD5 290 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 TISP43B9A030 160 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 OGTO15294 1046 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 INPPL1O15357 1258 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 TLL1O43897 1013 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 FAM189A1O60320 539 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 BMP6P22004 513 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 PRCPP42785 496 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 MATR3P43243 847 aaKnown RBP eCLIP21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 POU5F1Q01860 360 aaKnown RBP21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 SKOR2Q2VWA4 1001 aaPredicted RBP21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 FAM117BQ6P1L5 589 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 C12orf56Q8IXR9 622 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 ADSSL1Q8N142 457 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 RNF169Q8NCN4 708 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 POMGNT1Q8WZA1 660 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 LPPQ93052 612 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 MSTO1Q9BUK6 570 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 CCDC94Q9BW85 323 aaPredicted RBP21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 TMEM117Q9H0C3 514 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 RSAD1Q9HA92 442 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 TYW1Q9NV66 732 aaKnown RBP21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 AGO2Q9UKV8 859 aaKnown RBP21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 PCDHA11Q9Y5I1 949 aa21.16■□□□□ 0.98
PCOLCE-208ENST00000487172 FNDC1Q4ZHG4 1894 aaPredicted RBP21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 COL4A6Q14031 1691 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 OFD1O75665 1012 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 LDHAP00338 332 aaKnown RBP21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 FGFR1P11362 822 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 IBSPP21815 317 aaPredicted RBP21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 CLLU1OSQ5K130 101 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 ISM2Q6H9L7 571 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 THNSL1Q8IYQ7 743 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 SMYD4Q8IYR2 804 aaPredicted RBP21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 CMTR2Q8IYT2 770 aaKnown RBP21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 CEP120Q8N960 986 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 SP7Q8TDD2 431 aaPredicted RBP21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 SYAP1Q96A49 352 aaPredicted RBP21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 ACAP3Q96P50 834 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 CASD1Q96PB1 797 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 YME1L1Q96TA2 773 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 AGPAT3Q9NRZ7 376 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 TMEM63CQ9P1W3 806 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 MAPK8IP1Q9UQF2 711 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 TRAF3IP3Q9Y228 551 aa21.15■□□□□ 0.98
PCOLCE-208ENST00000487172 BIN1O00499 593 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 CLTAP09496 248 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 HARSP12081 509 aaKnown RBP21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 AKAP5P24588 427 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 NFKBIBQ15653 356 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 RAB30Q15771 203 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 CENPPQ6IPU0 288 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 ARMCX5Q6P1M9 558 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 GLB1LQ6UWU2 654 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 ABI1Q8IZP0 508 aa21.14■□□□□ 0.97
PCOLCE-208ENST00000487172 CBWD1Q9BRT8 395 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms