RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 CEP89Q96ST8 783 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 SCNM1Q9BWG6 230 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
U2AF1-211ENST00000486519 DNMT3BQ9UBC3 853 aaKnown RBP17.15■□□□□ 0.34
U2AF1-211ENST00000486519 MRPS17Q9Y2R5 130 aaKnown RBP17.15■□□□□ 0.34
U2AF1-211ENST00000486519 C8AP07357 584 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 ZNF806P0C7X5 589 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 SKIP12755 728 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 FCARP24071 287 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 SREBF1P36956 1147 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 RAB27AP51159 221 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 PRKCEQ02156 737 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 RTP2Q5QGT7 225 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 FUT10Q6P4F1 479 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
U2AF1-211ENST00000486519 FNIP2Q9P278 1114 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 NCANO14594 1321 aa17.14■□□□□ 0.33
U2AF1-211ENST00000486519 ERICH2A1L162 156 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 ECI2O75521 394 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 PSAPP07602 524 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
U2AF1-211ENST00000486519 SMARCA1P28370 1054 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 RBM25P49756 843 aaKnown RBP17.13■□□□□ 0.33
U2AF1-211ENST00000486519 TARBP2Q15633 366 aaKnown RBP17.13■□□□□ 0.33
U2AF1-211ENST00000486519 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
U2AF1-211ENST00000486519 CEP68Q76N32 757 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 CATSPER4Q7RTX7 472 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 LONP2Q86WA8 852 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 SMG8Q8ND04 991 aaKnown RBP17.13■□□□□ 0.33
U2AF1-211ENST00000486519 FAM3CQ92520 227 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 PGBD4Q96DM1 585 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 ZFP42Q96MM3 310 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 CLSTN3Q9BQT9 956 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 AGPAT5Q9NUQ2 364 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
U2AF1-211ENST00000486519 TMEM8BA6NDV4 472 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 CEBPBP17676 345 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 HOXA11P31270 313 aaPredicted RBP17.12■□□□□ 0.33
U2AF1-211ENST00000486519 ZNF76P36508 570 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 MLH1P40692 756 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 SCNN1GP51170 649 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 PLA2G2CQ5R387 149 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 PPM1LQ5SGD2 360 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 NIPA1Q7RTP0 329 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 GAD1Q99259 594 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 HES2Q9Y543 173 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 PCDHA10Q9Y5I2 948 aa17.12■□□□□ 0.33
U2AF1-211ENST00000486519 FOXD2O60548 495 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-211ENST00000486519 DDAH1O94760 285 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 EPN2O95208 641 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 C1RP00736 705 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 HNRNPA1P09651 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
U2AF1-211ENST00000486519 CLK2P49760 499 aaKnown RBP17.11■□□□□ 0.33
U2AF1-211ENST00000486519 PPP2R5DQ14738 602 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 KIAA1211LQ6NV74 962 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 C19orf48Q6RUI8 117 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 KBTBD6Q86V97 674 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 MB21D2Q8IYB1 491 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-211ENST00000486519 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 SLC7A14Q8TBB6 771 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 CRYGNQ8WXF5 182 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 DNASE1L2Q92874 299 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 FAM167AQ96KS9 214 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 BBC3Q96PG8 261 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-211ENST00000486519 MAP3K14Q99558 947 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 IFT122Q9HBG6 1241 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 RIC8AQ9NPQ8 531 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 KANSL3Q9P2N6 904 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 KIF26AQ9ULI4 1882 aaPredicted RBP17.11■□□□□ 0.33
U2AF1-211ENST00000486519 BPTFQ12830 3046 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 FREM2Q5SZK8 3169 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 IGSF10Q6WRI0 2623 aa17.11■□□□□ 0.33
U2AF1-211ENST00000486519 ARL5CA6NH57 179 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 E7EWF7 191 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 STBD1O95210 358 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 PXNP49023 591 aaPredicted RBP17.1■□□□□ 0.33
U2AF1-211ENST00000486519 PTH1RQ03431 593 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 TRDNQ13061 729 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 USP41Q3LFD5 358 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 MTERF2Q49AM1 385 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 PABPC1LQ4VXU2 614 aaKnown RBP17.1■□□□□ 0.33
U2AF1-211ENST00000486519 RNF43Q68DV7 783 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
U2AF1-211ENST00000486519 PAAF1Q9BRP4 392 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 EIF2AQ9BY44 585 aaKnown RBP17.1■□□□□ 0.33
U2AF1-211ENST00000486519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.1■□□□□ 0.33
U2AF1-211ENST00000486519 PIAS3Q9Y6X2 628 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 CNTNAP2Q9UHC6 1331 aa17.1■□□□□ 0.33
U2AF1-211ENST00000486519 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 CCNE1P24864 410 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 CNR2P34972 360 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 RAP1GAPP47736 663 aa17.09■□□□□ 0.33
U2AF1-211ENST00000486519 PTGDRQ13258 359 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms