RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TMEM169Q96HH4 297 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 IGSF21Q96ID5 467 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 PRIMPOLQ96LW4 560 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 AK8Q96MA6 479 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 CLIC6Q96NY7 704 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 NT5C3AQ9H0P0 336 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 ZSCAN16Q9H4T2 348 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-221ENST00000477561 UBN1Q9NPG3 1134 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 KMT5AQ9NQR1 393 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 KANSL3Q9P2N6 904 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 LZTS1Q9Y250 596 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 FAN1Q9Y2M0 1017 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 PRG3Q9Y2Y8 225 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-221ENST00000477561 ZDHHC9Q9Y397 364 aa9.12□□□□□ -0.95
HDAC6-221ENST00000477561 GRXCR2A6NFK2 248 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 TNFRSF10AO00220 468 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 NRP1O14786 923 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 N4BP3O15049 544 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 SLC16A4O15374 487 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 CXCL14O95715 111 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 GLP2RO95838 553 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 PLCG1P19174 1290 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 MCM4P33991 863 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 LONP1P36776 959 aaKnown RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 OR1G1P47890 313 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 EFNA5P52803 228 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 DMP1Q13316 513 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 MCM6Q14566 821 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 FOXD4L6Q3SYB3 417 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 ATF7IP2Q5U623 682 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 FOXD4L3Q6VB84 417 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 HACE1Q8IYU2 909 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 EFHBQ8N7U6 833 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 VN1R2Q8NFZ6 395 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 RABGGTAQ92696 567 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 DRC1Q96MC2 740 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 USP28Q96RU2 1077 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 VN1R3Q9BXE9 311 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 CXCL16Q9H2A7 254 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 NGRNQ9NPE2 291 aaKnown RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 CLEC1BQ9P126 229 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 CACNG4Q9UBN1 327 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 FBXO2Q9UK22 296 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 BARX2Q9UMQ3 279 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-221ENST00000477561 GDAQ9Y2T3 454 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 GIT1Q9Y2X7 761 aa9.11□□□□□ -0.95
HDAC6-221ENST00000477561 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 F8W810 466 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 RECQL4O94761 1208 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 GUCY2CP25092 1073 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 OSTNP61366 133 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 DUSP6Q16828 381 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 PDE12Q6L8Q7 609 aaKnown RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 TAS1R3Q7RTX0 852 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 TAS1R1Q7RTX1 841 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 ZBTB33Q86T24 672 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 DDX53Q86TM3 631 aaKnown RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 GPBP1Q86WP2 473 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 COLGALT2Q8IYK4 626 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 MRPL43Q8N983 215 aaKnown RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 GSTCDQ8NEC7 633 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 RSPH1Q8WYR4 309 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 RAD54LQ92698 747 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 RPS6KC1Q96S38 1066 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 ADPGKQ9BRR6 497 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 TMEM175Q9BSA9 504 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 TARS2Q9BW92 718 aaKnown RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 APOL5Q9BWW9 433 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 PANK2Q9BZ23 570 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 ZBP1Q9H171 429 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 CD320Q9NPF0 282 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 BLOC1S4Q9NUP1 217 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 MARCH5Q9NX47 278 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 CD207Q9UJ71 328 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 SRPRBQ9Y5M8 271 aaKnown RBP9.1□□□□□ -0.95
HDAC6-221ENST00000477561 CUL9Q8IWT3 2517 aa9.1□□□□□ -0.95
HDAC6-221ENST00000477561 MUC3AQ02505 3323 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 C2orf71A6NGG8 1288 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 C2CD2LO14523 706 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 INPPL1O15357 1258 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 MBTPS2O43462 519 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 CLASP2O75122 1294 aaKnown RBP9.09□□□□□ -0.95
HDAC6-221ENST00000477561 KRT18P05783 430 aaKnown RBP9.09□□□□□ -0.95
HDAC6-221ENST00000477561 HARSP12081 509 aaKnown RBP9.09□□□□□ -0.95
HDAC6-221ENST00000477561 PLS3P13797 630 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 DSC1Q08554 894 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 STK38Q15208 465 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
HDAC6-221ENST00000477561 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 KCTD17Q8N5Z5 321 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 CEP120Q8N960 986 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 TMEM87AQ8NBN3 555 aa9.09□□□□□ -0.95
HDAC6-221ENST00000477561 ZBTB45Q96K62 511 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-221ENST00000477561 MSLNLQ96KJ4 702 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms