RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 NCANO14594 1321 aa4.43□□□□□ -1.7
LRCH3-213ENST00000471667 OTOGLQ3ZCN5 2332 aa4.43□□□□□ -1.7
LRCH3-213ENST00000471667 COL11A1P12107 1806 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-213ENST00000471667 SIP14410 1827 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 C5orf67F2Z3F1 127 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 PRRG2O14669 202 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 HLA-DOAP06340 250 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 RETP07949 1114 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 TFE3P19532 575 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-213ENST00000471667 NRIP1P48552 1158 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 PSMC6P62333 389 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 HTRA4P83105 476 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-213ENST00000471667 TNFAIP2Q03169 654 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 PPP2R5DQ14738 602 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 RALGAPA2Q2PPJ7 1873 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 TSNAXIP1Q2TAA8 658 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 SPTY2D1Q68D10 685 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-213ENST00000471667 LAIR1Q6GTX8 287 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 C19orf48Q6RUI8 117 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 LRRC8DQ7L1W4 858 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 MICAL1Q8TDZ2 1067 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 SUSD6Q92537 303 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 CDK5RAP2Q96SN8 1893 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 BCAS3Q9H6U6 928 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 TLE6Q9H808 572 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 SP110Q9HB58 689 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 CABP5Q9NP86 173 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 SPATA6Q9NWH7 488 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-213ENST00000471667 ZSCAN32Q9NX65 697 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 DUSP13Q9UII6 198 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 ADAM30Q9UKF2 790 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 ZBTB21Q9ULJ3 1066 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 CEP131Q9UPN4 1083 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 SIT1Q9Y3P8 196 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 LAS1LQ9Y4W2 734 aaKnown RBP4.42□□□□□ -1.7
LRCH3-213ENST00000471667 EMSYQ7Z589 1322 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 RAD50Q92878 1312 aa4.42□□□□□ -1.7
LRCH3-213ENST00000471667 B8ZZF3 427 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 NUAK1O60285 661 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 PRPF40AO75400 957 aaKnown RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 FLOT1O75955 427 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 KCNK5O95279 499 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 INHBBP09529 407 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 ZGLP1P0C6A0 271 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 SRFP11831 508 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 HOXB8P17481 243 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 GTF2F1P35269 517 aaKnown RBP eCLIP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 BMPR1AP36894 532 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 MTHFRP42898 656 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 BTDP43251 543 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 CPT1AP50416 773 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 LIMK1P53667 647 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 LINC00310P59036 64 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 NKX3-2P78367 333 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 GSTO1P78417 241 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 RPL6Q02878 288 aaKnown RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 EGR3Q06889 387 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 TDGQ13569 410 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 RAB3GAP1Q15042 981 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 CSRP2Q16527 193 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 COL28A1Q2UY09 1125 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 NAALADL2Q58DX5 795 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 METTL24Q5JXM2 366 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 NFRKBQ6P4R8 1299 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 MAMDC4Q6UXC1 1216 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 KSR2Q6VAB6 950 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 RBM23Q86U06 439 aaKnown RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 TSPYL5Q86VY4 417 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 FOXP4Q8IVH2 680 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 ZDHHC14Q8IZN3 488 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 MAGEB6Q8N7X4 407 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 PDZD8Q8NEN9 1154 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 PPP1R13LQ8WUF5 828 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 VWCEQ96DN2 955 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 IL17RAQ96F46 866 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 FAM126AQ9BYI3 521 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 GPR62Q9BZJ7 368 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 KIAA1683Q9H0B3 1180 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 ERVK-5Q9HDB9 667 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 GPR108Q9NPR9 543 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 RXFP3Q9NSD7 469 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 SEMA4GQ9NTN9 838 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 Q9Y3F1 56 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 CTDP1Q9Y5B0 961 aaPredicted RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 AK5Q9Y6K8 562 aa4.41□□□□□ -1.7
LRCH3-213ENST00000471667 CNOT1A5YKK6 2376 aaKnown RBP4.41□□□□□ -1.7
LRCH3-213ENST00000471667 CEP295Q9C0D2 2601 aa4.4□□□□□ -1.7
LRCH3-213ENST00000471667 C2CD4DB7Z1M9 353 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 GRM6O15303 877 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 KPNA6O60684 536 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 SNAI1O95863 264 aaPredicted RBP4.4□□□□□ -1.71
LRCH3-213ENST00000471667 CXCL10P02778 98 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 LDHCP07864 332 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 PRDX5P30044 214 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 TECP42680 631 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 MAGEA9P43362 315 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 NOVA1P51513 510 aaKnown RBP4.4□□□□□ -1.71
LRCH3-213ENST00000471667 CSTF1Q05048 431 aaKnown RBP4.4□□□□□ -1.71
LRCH3-213ENST00000471667 ITIH3Q06033 890 aa4.4□□□□□ -1.71
LRCH3-213ENST00000471667 SNRNP48Q6IEG0 339 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms