RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 DYMQ7RTS9 669 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 SPPL3Q8TCT6 385 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 DDX12PQ92771 950 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 DNAJC19Q96DA6 116 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 NTPCRQ9BSD7 190 aaKnown RBP21.07■□□□□ 0.96
USP11-205ENST00000467378 FTHL17Q9BXU8 183 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 TNMDQ9H2S6 317 aa21.07■□□□□ 0.96
USP11-205ENST00000467378 RIF1Q5UIP0 2472 aaKnown RBP21.07■□□□□ 0.96
USP11-205ENST00000467378 GOLGA6L4A6NEF3 574 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 ACTN4O43707 911 aaKnown RBP21.06■□□□□ 0.96
USP11-205ENST00000467378 MGEA5O60502 916 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 GLP2RO95838 553 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 KRT18P05783 430 aaKnown RBP21.06■□□□□ 0.96
USP11-205ENST00000467378 PLS3P13797 630 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 SFPQP23246 707 aaKnown RBP eCLIP21.06■□□□□ 0.96
USP11-205ENST00000467378 SYKP43405 635 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 NPTX2P47972 431 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 ZNF131P52739 623 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 MBTD1Q05BQ5 628 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 DSC3Q14574 896 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 LONRF3Q496Y0 759 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 ZBTB33Q86T24 672 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 POF1BQ8WVV4 589 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 LINC01599Q8WXQ3 324 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 MAGEF1Q9HAY2 307 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 MRPL42Q9Y6G3 142 aaKnown RBP21.06■□□□□ 0.96
USP11-205ENST00000467378 MYO10Q9HD67 2058 aa21.06■□□□□ 0.96
USP11-205ENST00000467378 PRR23AA6NEV1 266 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 DGKIO75912 1065 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 PDGFBP01127 241 aaPredicted RBP21.05■□□□□ 0.96
USP11-205ENST00000467378 SLFN14P0C7P3 912 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 PTPN21Q16825 1174 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 CATSPER4Q7RTX7 472 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 ERMP1Q7Z2K6 904 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 KLHL23Q8NBE8 558 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 SPIRE2Q8WWL2 714 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 LRRC27Q9C0I9 530 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 C2orf40Q9H1Z8 148 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 FZD8Q9H461 694 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 USP25Q9UHP3 1055 aa21.05■□□□□ 0.96
USP11-205ENST00000467378 CCDC169A6NNP5 214 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 INO80B-WBP1J3KQ70 363 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 GALR2O43603 387 aaPredicted RBP21.04■□□□□ 0.96
USP11-205ENST00000467378 GADD45BO75293 160 aaPredicted RBP21.04■□□□□ 0.96
USP11-205ENST00000467378 NUBP1P53384 320 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 AMPD3Q01432 767 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 DMP1Q13316 513 aaPredicted RBP21.04■□□□□ 0.96
USP11-205ENST00000467378 PCBP1Q15365 356 aaKnown RBP eCLIP21.04■□□□□ 0.96
USP11-205ENST00000467378 AMHR2Q16671 573 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 ZBTB8OSQ8IWT0 167 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 ENGASEQ8NFI3 743 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 DEPTORQ8TB45 409 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 RIPOR3Q96MK2 946 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 C7orf25Q9BPX7 421 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 KIFC3Q9BVG8 833 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 CCDC113Q9H0I3 377 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 TLE6Q9H808 572 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 KMT5AQ9NQR1 393 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 RGS18Q9NS28 235 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 LARSQ9P2J5 1176 aaKnown RBP21.04■□□□□ 0.96
USP11-205ENST00000467378 KCNG1Q9UIX4 513 aa21.04■□□□□ 0.96
USP11-205ENST00000467378 FAM13AO94988 1023 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 ZNF202O95125 648 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 ATF7P17544 494 aaPredicted RBP21.03■□□□□ 0.96
USP11-205ENST00000467378 HOXA11P31270 313 aaPredicted RBP21.03■□□□□ 0.96
USP11-205ENST00000467378 FAM187BQ17R55 369 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 PAN2Q504Q3 1202 aaKnown RBP21.03■□□□□ 0.96
USP11-205ENST00000467378 CNNM4Q6P4Q7 775 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 CEP57L1Q8IYX8 460 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 FMR1NBQ8N0W7 255 aaPredicted RBP21.03■□□□□ 0.96
USP11-205ENST00000467378 MYCT1Q8N699 235 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 MICAL1Q8TDZ2 1067 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 ADAM2Q99965 735 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 TRIM9Q9C026 710 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 PARVGQ9HBI0 331 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 CHST12Q9NRB3 414 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 ARHGAP28Q9P2N2 729 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 PCDHGC5Q9Y5F6 944 aa21.03■□□□□ 0.96
USP11-205ENST00000467378 FRMD3A2A2Y4 597 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 SLC16A4O15374 487 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 TSPAN1O60635 241 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 TBCAO75347 108 aaKnown RBP21.02■□□□□ 0.96
USP11-205ENST00000467378 ZSCAN20P17040 1043 aaPredicted RBP21.02■□□□□ 0.96
USP11-205ENST00000467378 ID4P47928 161 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 EFNA5P52803 228 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 NCKAP1LP55160 1127 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 SNW1Q13573 536 aaKnown RBP21.02■□□□□ 0.96
USP11-205ENST00000467378 KRBA2Q6ZNG9 492 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 CMTR2Q8IYT2 770 aaKnown RBP21.02■□□□□ 0.96
USP11-205ENST00000467378 PAGE5Q96GU1 130 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 FIZ1Q96SL8 496 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 TMEM134Q9H6X4 195 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 AGPAT5Q9NUQ2 364 aa21.02■□□□□ 0.96
USP11-205ENST00000467378 PRMT7Q9NVM4 692 aaPredicted RBP21.02■□□□□ 0.96
USP11-205ENST00000467378 C9IYK1 514 aa21.01■□□□□ 0.95
USP11-205ENST00000467378 PER2O15055 1255 aa21.01■□□□□ 0.95
USP11-205ENST00000467378 TRAK2O60296 914 aa21.01■□□□□ 0.95
USP11-205ENST00000467378 ERLIN2O94905 339 aa21.01■□□□□ 0.95
USP11-205ENST00000467378 EDN1P05305 212 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms