RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	MYH15	Q9Y2K3	1946 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	GLRA2	P23416	452 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	PTPA	Q15257	358 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	KCNK18	Q7Z418	384 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	ZNF280B	Q86YH2	543 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	VPS52	Q8N1B4	723 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	KRI1	Q8N9T8	703 aa	Known RBP	14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	DEPTOR	Q8TB45	409 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	URGCP	Q8TCY9	931 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	EDA	Q92838	391 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	IFT74	Q96LB3	600 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	PNMA5	Q96PV4	448 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	UBN1	Q9NPG3	1134 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	DZANK1	Q9NVP4	752 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	KANSL3	Q9P2N6	904 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	FBXO2	Q9UK22	296 aa	Predicted RBP	14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	ZDBF2	Q9HCK1	2354 aa		14.03	□□□□□ -0.16
FDPS-204	ENST00000461507	CCDC169	A6NNP5	214 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	SPTLC2	O15270	562 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	DDHD2	O94830	711 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	EFEMP2	O95967	443 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	PLA2G4B	P0C869	781 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	CYP11B2	P19099	503 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	PLCG1	P19174	1290 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	ANP32A	P39687	249 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	AFF1	P51825	1210 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	DNM1	Q05193	864 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	RNASEL	Q05823	741 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	ITIH3	Q06033	890 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	DSC1	Q08554	894 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	NCBP1	Q09161	790 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	BMS1	Q14692	1282 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	SLC39A14	Q15043	492 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	PTPN14	Q15678	1187 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	LONRF3	Q496Y0	759 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	LLGL2	Q6P1M3	1020 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	NOTUM	Q6P988	496 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	BMP8A	Q7Z5Y6	402 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	RNF168	Q8IYW5	571 aa	Predicted RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	SLC22A17	Q8WUG5	538 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	EPSTI1	Q96J88	318 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	NECTIN4	Q96NY8	510 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	RUSC1	Q9BVN2	902 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	EIF2A	Q9BY44	585 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	KCNH6	Q9H252	994 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	ADAM7	Q9H2U9	754 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	ZHX3	Q9H4I2	956 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	IPP	Q9Y573	584 aa		14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	SRPRB	Q9Y5M8	271 aa	Known RBP	14.02	□□□□□ -0.17
FDPS-204	ENST00000461507	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	LILRB3	O75022	631 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	HIP1R	O75146	1068 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	CXCL14	O95715	111 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	ARF4	P18085	180 aa	Predicted RBP	14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	ME1	P48163	572 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	NASP	P49321	788 aa	Predicted RBP	14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	CACNB1	Q02641	598 aa	Predicted RBP	14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	PPP2R5A	Q15172	486 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	TMEM119	Q4V9L6	283 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	RRAGB	Q5VZM2	374 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	CDCA2	Q69YH5	1023 aa	Predicted RBP	14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	PPP4R3CP	Q6ZMV5	832 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	HFE2	Q6ZVN8	426 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	GPBP1	Q86WP2	473 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	KIFAP3	Q92845	792 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	CPB2	Q96IY4	423 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	DRC1	Q96MC2	740 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	MARCH5	Q9NX47	278 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	CFAP45	Q9UL16	551 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	C2orf16	Q68DN1	1984 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	PLXNA3	P51805	1871 aa		14.01	□□□□□ -0.17
FDPS-204	ENST00000461507	TRIO	O75962	3097 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	YEATS4	O95619	227 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	ITGA4	P13612	1032 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	HOXD11	P31277	338 aa	Predicted RBP	14	□□□□□ -0.17
FDPS-204	ENST00000461507	STAT6	P42226	847 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	ZXDA	P98168	799 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	DMP1	Q13316	513 aa	Predicted RBP	14	□□□□□ -0.17
FDPS-204	ENST00000461507	MCM6	Q14566	821 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	HYI	Q5T013	277 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	KIAA1841	Q6NSI8	718 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	RINT1	Q6NUQ1	792 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	TRIM67	Q6ZTA4	783 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	COLGALT2	Q8IYK4	626 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	PDILT	Q8N807	584 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	LINC00301	Q8NCQ3	95 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	AUTS2	Q8WXX7	1259 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	RPGRIP1	Q96KN7	1286 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	PRIMPOL	Q96LW4	560 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	KIFC3	Q9BVG8	833 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	HERC2P3	Q9BVR0	1158 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	PANK2	Q9BZ23	570 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	TRIM6	Q9C030	488 aa	Predicted RBP	14	□□□□□ -0.17
FDPS-204	ENST00000461507	GBP3	Q9H0R5	595 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	ATP6V1D	Q9Y5K8	247 aa		14	□□□□□ -0.17
FDPS-204	ENST00000461507	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507		A0A1B0GUA9	196 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	ARL5C	A6NH57	179 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	NRP1	O14786	923 aa		13.99	□□□□□ -0.17
FDPS-204	ENST00000461507	B4GALT5	O43286	388 aa		13.99	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms