RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 SERTAD1Q9UHV2 236 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 INPP5FQ9Y2H2 1132 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 IPPQ9Y573 584 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 PHLPP2Q6ZVD8 1323 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 CNTNAP2Q9UHC6 1331 aa11.09□□□□□ -0.63
RFX3-210ENST00000457373 COL4A4P53420 1690 aaPredicted RBP11.08□□□□□ -0.64
RFX3-210ENST00000457373 K7ENM7 598 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 OFD1O75665 1012 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 AKAP5P24588 427 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 NMT1P30419 496 aaKnown RBP11.08□□□□□ -0.64
RFX3-210ENST00000457373 BMPR1AP36894 532 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 NCKAP1LP55160 1127 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 STRN3Q13033 797 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 ADGRE1Q14246 886 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 ATF7IP2Q5U623 682 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 LRRC55Q6ZSA7 311 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 HAUS6Q7Z4H7 955 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 PPM1EQ8WY54 764 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 DNAJC19Q96DA6 116 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 ADPGKQ9BRR6 497 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 TARS2Q9BW92 718 aaKnown RBP11.08□□□□□ -0.64
RFX3-210ENST00000457373 MRPL4Q9BYD3 311 aaKnown RBP11.08□□□□□ -0.64
RFX3-210ENST00000457373 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 CUEDC2Q9H467 287 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 CWH43Q9H720 699 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 RSAD1Q9HA92 442 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 TBC1D7Q9P0N9 293 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 PARP2Q9UGN5 583 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 KCNH3Q9ULD8 1083 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 RWDD3Q9Y3V2 267 aa11.08□□□□□ -0.64
RFX3-210ENST00000457373 TDRD15B5MCY1 1934 aaKnown RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 H0YCG3 227 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 LINC00271P0C7V0 271 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 MAPTP10636 758 aaKnown RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 HARSP12081 509 aaKnown RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 PFKFB1P16118 471 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 CMA1P23946 247 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 MATR3P43243 847 aaKnown RBP eCLIP11.07□□□□□ -0.642e-9■■■□□ 18.9
RFX3-210ENST00000457373 AFMP43652 599 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 ZNF131P52739 623 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 AMPD3Q01432 767 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 GLB1LQ6UWU2 654 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 ZBTB33Q86T24 672 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 SFR1Q86XK3 245 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 FAM178BQ8IXR5 827 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 HACE1Q8IYU2 909 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 CEP57L1Q8IYX8 460 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 LRRC43Q8N309 656 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 MICALL1Q8N3F8 863 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 TMEM161BQ8NDZ6 487 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 CLP1Q92989 425 aaKnown RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 ZBTB45Q96K62 511 aaPredicted RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 ACO2Q99798 780 aaKnown RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 TCHPQ9BT92 498 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 MRPL9Q9BYD2 267 aaKnown RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 GBP3Q9H0R5 595 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 TNMDQ9H2S6 317 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 NXF3Q9H4D5 531 aaKnown RBP11.07□□□□□ -0.64
RFX3-210ENST00000457373 UBN1Q9NPG3 1134 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 PANK4Q9NVE7 773 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 KBTBD4Q9NVX7 518 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 MIOSQ9NXC5 875 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 SNTG2Q9NY99 539 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 CHMP5Q9NZZ3 219 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 TNFSF13BQ9Y275 285 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 STXBP5LQ9Y2K9 1186 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 ADGRG1Q9Y653 693 aa11.07□□□□□ -0.64
RFX3-210ENST00000457373 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 H3BNC9 293 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 LPXNO60711 386 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 CSPG5O95196 566 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 POMCP01189 267 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 RB1P06400 928 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 GAP43P17677 238 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 LAG3P18627 525 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 CASP1P29466 404 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 AFF1P51825 1210 aaKnown RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 RNASELQ05823 741 aaKnown RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 CCDC85BQ15834 202 aaPredicted RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 ZNF568Q3ZCX4 644 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 ZC2HC1CQ53FD0 456 aaPredicted RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 THNSL1Q8IYQ7 743 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 FSIP1Q8NA03 581 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 KLHL23Q8NBE8 558 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 COLGALT1Q8NBJ5 622 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 URGCPQ8TCY9 931 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 BICD1Q96G01 975 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 FAM193BQ96PV7 902 aaPredicted RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 FIZ1Q96SL8 496 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 GAD1Q99259 594 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 PYM1Q9BRP8 204 aaKnown RBP11.06□□□□□ -0.64
RFX3-210ENST00000457373 BLZF1Q9H2G9 400 aa11.06□□□□□ -0.64
RFX3-210ENST00000457373 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms