RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 NLRP8Q86W28 1048 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 FAM156AQ8NDB6 213 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ST13P5Q8NFI4 369 aaPredicted RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ADPGKQ9BRR6 497 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 RNF26Q9BY78 433 aaPredicted RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 ABCB6Q9NP58 842 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 DCP1AQ9NPI6 582 aaPredicted RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 TCF7L2Q9NQB0 619 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 HOMER3Q9NSC5 361 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 TBC1D29Q9UFV1 150 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 EDARQ9UNE0 448 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 NSFL1CQ9UNZ2 370 aaKnown RBP8.47□□□□□ -1.05
BRCC3-208ENST00000453705 TMEM98Q9Y2Y6 226 aa8.47□□□□□ -1.05
BRCC3-208ENST00000453705 SLC12A8A0AV02 714 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 SNAP23O00161 211 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 GADD45BO75293 160 aaPredicted RBP8.46□□□□□ -1.06
BRCC3-208ENST00000453705 USP2O75604 605 aaPredicted RBP8.46□□□□□ -1.06
BRCC3-208ENST00000453705 POU2F2P09086 479 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 GBP2P32456 591 aaPredicted RBP8.46□□□□□ -1.06
BRCC3-208ENST00000453705 BNIP1Q12981 228 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 KCNB1Q14721 858 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 TTC31Q49AM3 519 aaPredicted RBP8.46□□□□□ -1.06
BRCC3-208ENST00000453705 HAUS3Q68CZ6 603 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 C4orf50Q6ZRC1 276 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 KIAA1524Q8TCG1 905 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 EXOC2Q96KP1 924 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 CITED4Q96RK1 184 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 SLF1Q9BQI6 1058 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 CD209Q9NNX6 404 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 MED4Q9NPJ6 270 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 DISC1Q9NRI5 854 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 SLC30A1Q9Y6M5 507 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 FER1L6Q2WGJ9 1857 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 SCN9AQ15858 1988 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 VPS37CA5D8V6 355 aaPredicted RBP8.46□□□□□ -1.06
BRCC3-208ENST00000453705 KLRK1P26718 216 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 HAND2P61296 217 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 KIF23Q02241 960 aaPredicted RBP8.46□□□□□ -1.06
BRCC3-208ENST00000453705 CDC16Q13042 620 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 ARHGEF6Q15052 776 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 ANO4Q32M45 955 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 RAB12Q6IQ22 244 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 NXPE4Q6UWF7 544 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 TMEM92Q6UXU6 159 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 PDCL2Q8N4E4 241 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 CPA6Q8N4T0 437 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 LINC00469Q8N7U9 141 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 TBC1D16Q8TBP0 767 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 CENPIQ92674 756 aaPredicted RBP8.46□□□□□ -1.06
BRCC3-208ENST00000453705 TRIM63Q969Q1 353 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 HIC2Q96JB3 615 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 CLSTN2Q9H4D0 955 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 PCDHGA11Q9Y5H2 935 aa8.46□□□□□ -1.06
BRCC3-208ENST00000453705 B4E1Z4 1266 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 H3BQV1 296 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 PPP6R2O75170 966 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 PAPLNO95428 1278 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 HTRA3P83110 453 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 C12orf60Q5U649 245 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 TYW1BQ6NUM6 668 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 TLDC1Q6P9B6 456 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 ISLR2Q6UXK2 745 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 RDH13Q8NBN7 331 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 KCNG4Q8TDN1 519 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 SGCDQ92629 289 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 RRP36Q96EU6 259 aaKnown RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 BICD1Q96G01 975 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 MASTLQ96GX5 879 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 GLT8D2Q9H1C3 349 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 COQ3Q9NZJ6 369 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 ORC3Q9UBD5 711 aaPredicted RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 LRFN2Q9ULH4 789 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 SUFUQ9UMX1 484 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 PCDHGA10Q9Y5H3 936 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 ADAMTSL1Q8N6G6 1762 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 A0A1W2PPH5 198 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 PPEF1O14829 653 aaPredicted RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 CASQ2O14958 399 aaPredicted RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 PRKAB2O43741 272 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 FBXO21O94952 628 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 DEXIO95424 95 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 BAG3O95817 575 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 PRLRP16471 622 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 NOP2P46087 812 aaKnown RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 TM4SF4P48230 202 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 CPT1AP50416 773 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 CLCN2P51788 898 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 SPARCL1Q14515 664 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 TERF2Q15554 542 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 TEAD4Q15561 434 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 RUFY4Q6ZNE9 571 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 NOSTRINQ8IVI9 506 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 PDCD7Q8N8D1 485 aaKnown RBP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
BRCC3-208ENST00000453705 ENGASEQ8NFI3 743 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 SHC3Q92529 594 aa8.45□□□□□ -1.06
BRCC3-208ENST00000453705 C8orf76Q96K31 380 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms