RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 FZD6O60353 706 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PLOD3O60568 738 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 DNAJC8O75937 253 aaPredicted RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 FSBPO95073 299 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SLC3A2P08195 630 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 ACTN1P12814 892 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 ATP6V1B1P15313 513 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 IL10P22301 178 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SOX6P35712 828 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CEBPAP49715 358 aaPredicted RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 HADHBP55084 474 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 USP46P62068 366 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 KRT85P78386 507 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TMPRSS15P98073 1019 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PURAQ00577 322 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TFAP4Q01664 338 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SULT2A1Q06520 285 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 IFRD2Q12894 506 aaPredicted RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TRAP1Q12931 704 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TCEA2Q15560 299 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 ANO4Q32M45 955 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 GFOD2Q3B7J2 385 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 AADACL4Q5VUY2 407 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 RALYLQ86SE5 291 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 ERICH1Q86X53 443 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CCDC13Q8IYE1 715 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TRMT2AQ8IZ69 625 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 FAM26EQ8N5C1 309 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SUPT20HQ8NEM7 779 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 AGR3Q8TD06 166 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 RNF139Q8WU17 664 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SLC47A1Q96FL8 570 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SEC16BQ96JE7 1060 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 WDR24Q96S15 920 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 STRBPQ96SI9 672 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 C19orf43Q9BQ61 176 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 YIPF4Q9BSR8 244 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CARD14Q9BXL6 1004 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SRCIN1Q9C0H9 1055 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 GBP3Q9H0R5 595 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CENPHQ9H3R5 247 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TMEM206Q9H813 350 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 C12orf10Q9HB07 376 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 NEK6Q9HC98 313 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 WASH6PQ9NQA3 447 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CNGB3Q9NQW8 809 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 MSRB2Q9Y3D2 182 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CEP170BQ9Y4F5 1589 aaPredicted RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PCDHGA2Q9Y5H1 932 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CDC42BPBQ9Y5S2 1711 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TLL2Q9Y6L7 1015 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SLC4A7Q9Y6M7 1214 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 NKTRP30414 1462 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SPATA31A6Q5VVP1 1343 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 IQGAP1P46940 1657 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 MAP3K5Q99683 1374 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 IQANK1A0A1B0GTG1 560 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SERTM1A2A2V5 107 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 H0Y626 953 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 J3KRW8 73 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 UBXN8O00124 270 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 GREM1O60565 184 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 OXSR1O95747 527 aaPredicted RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 RETP07949 1114 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PDHA1P08559 390 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 NAGAP17050 411 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 KRT4P19013 534 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 AXLP30530 894 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 L1CAMP32004 1257 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CSTF2P33240 577 aaKnown RBP eCLIP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TRIM23P36406 574 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CLCN4P51793 760 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 ARFIP1P53367 373 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 IL1RL1Q01638 556 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SLFN5Q08AF3 891 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TBL3Q12788 808 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CSTF3Q12996 717 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 MAPRE2Q15555 327 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TUBB8Q3ZCM7 444 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 ERFEQ4G0M1 354 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 SLC45A4Q5BKX6 768 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 DACT2Q5SW24 774 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TMEM132EQ6IEE7 984 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TMEM214Q6NUQ4 689 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 BNC2Q6ZN30 1099 aaPredicted RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PPP1R42Q7Z4L9 355 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 TBC1D1Q86TI0 1168 aaPredicted RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 CD302Q8IX05 232 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 HACE1Q8IYU2 909 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 NSUN7Q8NE18 718 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 WNT2BQ93097 391 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 MED30Q96HR3 178 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PGBD1Q96JS3 809 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 DMRTB1Q96MA1 342 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 HS6ST2Q96MM7 605 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PLIN2Q99541 437 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PIP5K1AQ99755 562 aa5.32□□□□□ -1.56
EPHA3-202ENST00000452448 DDX50Q9BQ39 737 aaKnown RBP5.32□□□□□ -1.56
EPHA3-202ENST00000452448 PLEKHA4Q9H4M7 779 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms