RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ASGR2P07307 311 aa22.99■■□□□ 1.27
CPNE1-219ENST00000440240 ATP2B1P20020 1258 aa22.99■■□□□ 1.27
CPNE1-219ENST00000440240 TCF15Q12870 199 aa22.99■■□□□ 1.27
CPNE1-219ENST00000440240 CYP26C1Q6V0L0 522 aa22.99■■□□□ 1.27
CPNE1-219ENST00000440240 RNF168Q8IYW5 571 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-219ENST00000440240 CMASQ8NFW8 434 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-219ENST00000440240 PRIMPOLQ96LW4 560 aa22.99■■□□□ 1.27
CPNE1-219ENST00000440240 NXF3Q9H4D5 531 aaKnown RBP22.99■■□□□ 1.27
CPNE1-219ENST00000440240 RXFP1Q9HBX9 757 aa22.99■■□□□ 1.27
CPNE1-219ENST00000440240 LIMCH1Q9UPQ0 1083 aa22.99■■□□□ 1.27
CPNE1-219ENST00000440240 LRRIQ4A6NIV6 560 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 C1RP00736 705 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 AKAP5P24588 427 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 DSG1Q02413 1049 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 ORC2Q13416 577 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-219ENST00000440240 MAEAQ7L5Y9 396 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 GPR65Q8IYL9 337 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 ERMNQ8TAM6 284 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 POLR3CQ9BUI4 534 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-219ENST00000440240 RHOBTB2Q9BYZ6 727 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 CHST7Q9NS84 486 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 PRMT7Q9NVM4 692 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-219ENST00000440240 ZMYM2Q9UBW7 1377 aa22.98■■□□□ 1.27
CPNE1-219ENST00000440240 ARID2Q68CP9 1835 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 NPTXRO95502 500 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 GLUD1P00367 558 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 PDGFBP01127 241 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-219ENST00000440240 PPP4R3CPQ6ZMV5 832 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 ZBTB8OSQ8IWT0 167 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 GSTCDQ8NEC7 633 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 HDAC7Q8WUI4 952 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 LLPHQ9BRT6 129 aaKnown RBP22.97■■□□□ 1.27
CPNE1-219ENST00000440240 FZD8Q9H461 694 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 GPRC5CQ9NQ84 441 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 MAN1C1Q9NR34 630 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.97■■□□□ 1.27
CPNE1-219ENST00000440240 PARP2Q9UGN5 583 aa22.97■■□□□ 1.27
CPNE1-219ENST00000440240 CCDC195A0A1B0GUA6 201 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 MED24O75448 989 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 RPA1P27694 616 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 GUCY1B3Q02153 619 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 GRIK3Q13003 919 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 FAM187BQ17R55 369 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 USP41Q3LFD5 358 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 CDR2LQ86X02 465 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-219ENST00000440240 C8orf76Q96K31 380 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 C2orf40Q9H1Z8 148 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 FOXP1Q9H334 677 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-219ENST00000440240 PLEKHA4Q9H4M7 779 aa22.96■■□□□ 1.27
CPNE1-219ENST00000440240 DAXXQ9UER7 740 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-219ENST00000440240 CDCA2Q69YH5 1023 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-219ENST00000440240 STAMQ92783 540 aa22.95■■□□□ 1.26
CPNE1-219ENST00000440240 PHOX2BQ99453 314 aa22.95■■□□□ 1.26
CPNE1-219ENST00000440240 KLK14Q9P0G3 267 aa22.95■■□□□ 1.26
CPNE1-219ENST00000440240 ADAM28Q9UKQ2 775 aa22.95■■□□□ 1.26
CPNE1-219ENST00000440240 TADA2AO75478 443 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 OR52Z1P0C646 297 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 MUTP22033 750 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 RBM25P49756 843 aaKnown RBP22.94■■□□□ 1.26
CPNE1-219ENST00000440240 CREMQ03060 361 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 ST3GAL1Q11201 340 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 TDGQ13569 410 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 ZNF174Q15697 407 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 MAPK6Q16659 721 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 FUT10Q6P4F1 479 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 PADI6Q6TGC4 694 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 FEZF2Q8TBJ5 459 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 GPR62Q9BZJ7 368 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 MFSD1Q9H3U5 465 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 SMOC2Q9H3U7 446 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 WDR6Q9NNW5 1121 aaKnown RBP22.94■■□□□ 1.26
CPNE1-219ENST00000440240 FNIP2Q9P278 1114 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 IGSF9Q9P2J2 1179 aa22.94■■□□□ 1.26
CPNE1-219ENST00000440240 ARHGEF35A5YM69 484 aa22.93■■□□□ 1.26
CPNE1-219ENST00000440240 F8W810 466 aa22.93■■□□□ 1.26
CPNE1-219ENST00000440240 N4BP3O15049 544 aa22.93■■□□□ 1.26
CPNE1-219ENST00000440240 CYP11B2P19099 503 aa22.93■■□□□ 1.26
CPNE1-219ENST00000440240 PRPF4BQ13523 1007 aaKnown RBP22.93■■□□□ 1.26
CPNE1-219ENST00000440240 TMEM132AQ24JP5 1023 aa22.93■■□□□ 1.26
CPNE1-219ENST00000440240 CCDC83Q8IWF9 413 aa22.93■■□□□ 1.26
CPNE1-219ENST00000440240 ATOH1Q92858 354 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-219ENST00000440240 KCNK12Q9HB15 430 aa22.93■■□□□ 1.26
CPNE1-219ENST00000440240 GALR2O43603 387 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-219ENST00000440240 SEC24BO95487 1268 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 NAMPTP43490 491 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 CLCN5P51795 746 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 HMGN5P82970 282 aaKnown RBP22.92■■□□□ 1.26
CPNE1-219ENST00000440240 TUSC3Q13454 348 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 GNL2Q13823 731 aaKnown RBP22.92■■□□□ 1.26
CPNE1-219ENST00000440240 PPP2R5AQ15172 486 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 HAUS3Q68CZ6 603 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 ASTLQ6HA08 431 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-219ENST00000440240 POTEGQ6S5H5 508 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 PALB2Q86YC2 1186 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 FBXO18Q8NFZ0 1043 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 RIN2Q8WYP3 895 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-219ENST00000440240 ZSCAN31Q96LW9 406 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-219ENST00000440240 ADPGKQ9BRR6 497 aa22.92■■□□□ 1.26
CPNE1-219ENST00000440240 ZFHX2Q9C0A1 2572 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-219ENST00000440240 SF3B1O75533 1304 aaKnown RBP eCLIP22.91■■□□□ 1.263e-7■■■■■ 90.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms