RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MKS1Q9NXB0 559 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 MATN3O15232 486 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 NDUFS2O75306 463 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 ACRV1P26436 265 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 SREBF1P36956 1147 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 RRP1BQ14684 758 aaKnown RBP6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 NOMO1Q15155 1222 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 PTPN21Q16825 1174 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 USP39Q53GS9 565 aaKnown RBP6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 MDGA1Q8NFP4 955 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 NRG4Q8WWG1 115 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 PGBD4Q96DM1 585 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 CDK5RAP1Q96SZ6 601 aaKnown RBP6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 GPR20Q99678 358 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 LDAHQ9H6V9 325 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 SERPINB13Q9UIV8 391 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 DNM3Q9UQ16 869 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 ATRNL1Q5VV63 1379 aa6.05□□□□□ -1.44
HMGB1P49-201ENST00000418882 hCG_2014768A0A024R1R8 64 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 SHTN1A0MZ66 631 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 XPOTO43592 962 aaKnown RBP6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 ZRANB2O95218 330 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 GSPT1P15170 499 aaKnown RBP6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 HK1P19367 917 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 TNFRSF1AP19438 455 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 DGCR2P98153 550 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 APBA1Q02410 837 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 MGAT2Q10469 447 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 ACAP2Q15057 778 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 RNF207Q6ZRF8 634 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 APBB1IPQ7Z5R6 666 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 OR7D4Q8NG98 312 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 OR52N2Q8NGI0 321 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 SLC35B2Q8TB61 432 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 ST8SIA2Q92186 375 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 PDCD2LQ9BRP1 358 aa6.04□□□□□ -1.44
HMGB1P49-201ENST00000418882 GRXCR1A8MXD5 290 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 C1SP09871 688 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 FPR1P21462 350 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 EDNRBP24530 442 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 ECHS1P30084 290 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 CRHR1P34998 444 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 HHEXQ03014 270 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 PUM1Q14671 1186 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 MFSD5Q6N075 450 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 HTR3DQ70Z44 454 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 GPRIN1Q7Z2K8 1008 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 ANKRD35Q8N283 1001 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 ATXN2LQ8WWM7 1075 aaKnown RBP6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 RAB24Q969Q5 203 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 PAWRQ96IZ0 340 aaKnown RBP6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 CDC5LQ99459 802 aaKnown RBP6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 ADI1Q9BV57 179 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 BCO1Q9HAY6 547 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 CEP72Q9P209 647 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 GIT1Q9Y2X7 761 aa6.03□□□□□ -1.44
HMGB1P49-201ENST00000418882 KLHL33A6NCF5 533 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 PHF2O75151 1096 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 GASTP01350 101 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 ALOX15P16050 662 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 GNAT2P19087 354 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 IBSPP21815 317 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 PCSK1P29120 753 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 GUCY1A2P33402 732 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 KRT85P78386 507 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 DOK3Q7L591 496 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZNF572Q7Z3I7 529 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 SYT12Q8IV01 421 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 PQLC1Q8N2U9 271 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZGPATQ8N5A5 531 aaKnown RBP6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 STON2Q8WXE9 905 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 MNTQ99583 582 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 CPPED1Q9BRF8 314 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 GPR87Q9BY21 358 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 SLC13A1Q9BZW2 595 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 EPC1Q9H2F5 836 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 DDX56Q9NY93 547 aaKnown RBP6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 LIMCH1Q9UPQ0 1083 aa6.02□□□□□ -1.45
HMGB1P49-201ENST00000418882 AMY1AP04745 511 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 PTPN7P35236 360 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 SLC25A3Q00325 362 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 ZXDCQ2QGD7 858 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 C3orf36Q3SXR2 165 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 NRN1LQ496H8 165 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 TMPRSS6Q8IU80 811 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 C1orf210Q8IVY1 113 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 Q8N1X5 172 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 RNF169Q8NCN4 708 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 INTUQ9ULD6 942 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 MYRFQ9Y2G1 1151 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 IPPQ9Y573 584 aa6.01□□□□□ -1.45
HMGB1P49-201ENST00000418882 XDHP47989 1333 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 PNPLA7Q6ZV29 1317 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 CXorf49A8MYA2 514 aaPredicted RBP6□□□□□ -1.45
HMGB1P49-201ENST00000418882 MFAP3LO75121 409 aa6□□□□□ -1.45
HMGB1P49-201ENST00000418882 IPO13O94829 963 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms