RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SLC5A3P53794 718 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 SLC25A3Q00325 362 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 ABHD18Q0P651 414 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 ADRM1Q16186 407 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 FAM214AQ32MH5 1076 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 MUM1L1Q5H9M0 696 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 RNF187Q5TA31 235 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 DRICH1Q6PGQ1 229 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 DDX42Q86XP3 938 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 AMER2Q8N7J2 671 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 MB21D1Q8N884 522 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 TGFBRAP1Q8WUH2 860 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 RIN2Q8WYP3 895 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 MENTQ9BUN1 341 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 LSM14BQ9BX40 385 aaKnown RBP4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 PUS7LQ9H0K6 701 aaKnown RBP4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 PCED1AQ9H1Q7 454 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 CLSPNQ9HAW4 1339 aa4.95□□□□□ -1.62
HMGB3P23-201ENST00000414981 ZMYM3Q14202 1370 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 PRR5-ARHGAP8B1AHC4 643 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 AKR1B10O60218 316 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 RECQL4O94761 1208 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 ZNF202O95125 648 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 HK1P19367 917 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 MAKP20794 623 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 ERVK-21P61565 698 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 FAM47AQ5JRC9 791 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 IGFL4Q6B9Z1 124 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 ZNF483Q8TF39 744 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 ZNF480Q8WV37 535 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 ACE2Q9BYF1 805 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 FAM126AQ9BYI3 521 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 QRSL1Q9H0R6 528 aaKnown RBP4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 BCO1Q9HAY6 547 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 RBM12Q9NTZ6 932 aaKnown RBP4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 ATP8A1Q9Y2Q0 1164 aa4.94□□□□□ -1.62
HMGB3P23-201ENST00000414981 B5MCH6 92 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 TRIM24O15164 1050 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 SLPIP03973 132 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 MTNR1BP49286 362 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 BMT2Q1RMZ1 405 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 MST1LQ2TV78 715 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 TOR2AQ5JU69 321 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 NECAB2Q7Z6G3 386 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 CERS3Q8IU89 383 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 ULK2Q8IYT8 1036 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 OR7D4Q8NG98 312 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 RB1CC1Q8TDY2 1594 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 HAS1Q92839 578 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 DCLRE1CQ96SD1 692 aaKnown RBP4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 NDC1Q9BTX1 674 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 CPEB1Q9BZB8 566 aaKnown RBP4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 MMRN2Q9H8L6 949 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 SLC2A4RGQ9NR83 387 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 DNAJC28Q9NX36 388 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 SLC5A4Q9NY91 659 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 WASHC2AQ641Q2 1341 aa4.93□□□□□ -1.62
HMGB3P23-201ENST00000414981 TRIM75PA6NK02 468 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 DIRC3C9JPN6 131 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 PJA2O43164 708 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 PPFIA4O75335 1185 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 GSPT1P15170 499 aaKnown RBP4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 MGAT1P26572 445 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 ADSLP30566 484 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 PTGS2P35354 604 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 MCAMP43121 646 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 FLT3LGP49771 235 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 SRSF2Q01130 221 aaKnown RBP4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 KLF1Q13351 362 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 Q6ZVL8 140 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 XYLT1Q86Y38 959 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 ZFPM1Q8IX07 1006 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 MDM1Q8TC05 714 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 SLC25A43Q8WUT9 341 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 SSH1Q8WYL5 1049 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 LENG9Q96B70 501 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 PGBD4Q96DM1 585 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 MRIQ9BWK5 157 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 KCNH6Q9H252 994 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 GPRC5BQ9NZH0 403 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 BCCIPQ9P287 314 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 ZBTB21Q9ULJ3 1066 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 FZD1Q9UP38 647 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 SORCS3Q9UPU3 1222 aa4.92□□□□□ -1.62
HMGB3P23-201ENST00000414981 RSF1Q96T23 1441 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 PPM1GO15355 546 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 FAM20BO75063 409 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 RBP3P10745 1247 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 HMGA2P52926 109 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 TGFB2P61812 414 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 PURAQ00577 322 aaKnown RBP4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 DPTQ07507 201 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 PPP3CAQ08209 521 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 MALLQ13021 153 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 KLF10Q13118 480 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 INAVAQ3KP66 663 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 PRAMEF14Q5SWL7 426 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 MBNL2Q5VZF2 373 aaKnown RBP4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 ANKS6Q68DC2 871 aa4.91□□□□□ -1.62
HMGB3P23-201ENST00000414981 EFCAB12Q6NXP0 572 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms