RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 NRP1O14786 923 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 DCXO43602 365 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 DDHD2O94830 711 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 POMCP01189 267 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 SLC11A1P49279 550 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 DSC1Q08554 894 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 PRPF4BQ13523 1007 aaKnown RBP16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 CES5AQ6NT32 575 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 COLGALT2Q8IYK4 626 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 SUSD6Q92537 303 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 CPB2Q96IY4 423 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 AK8Q96MA6 479 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 DRC1Q96MC2 740 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 GBP3Q9H0R5 595 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 S1PR5Q9H228 398 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 GPRC5CQ9NQ84 441 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 DZANK1Q9NVP4 752 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 KCND2Q9NZV8 630 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 DNAJB4Q9UDY4 337 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 PCDHGC5Q9Y5F6 944 aa16.05■□□□□ 0.16
NIF3L1-205ENST00000409588 K7ERI5 159 aa16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 CLASP2O75122 1294 aaKnown RBP16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 CBX2Q14781 532 aaPredicted RBP16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 HYIQ5T013 277 aa16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 ELMSAN1Q6PJG2 1045 aa16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 GAD1Q99259 594 aa16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 NTPCRQ9BSD7 190 aaKnown RBP16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 ADAM7Q9H2U9 754 aa16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 MRPL17Q9NRX2 175 aaKnown RBP16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 HCFC2Q9Y5Z7 792 aa16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 ATG2AQ2TAZ0 1938 aa16.04■□□□□ 0.16
NIF3L1-205ENST00000409588 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 PRR33A8MZF0 331 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 LOC730098B7Z3J9 87 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 SOD2P04179 222 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 SCP2P22307 547 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 GRIK3Q13003 919 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 NBR1Q14596 966 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 ECM1Q16610 540 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 TMEM132AQ24JP5 1023 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 VN1R2Q8NFZ6 395 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 CCDC113Q9H0I3 377 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 TMEM134Q9H6X4 195 aa16.03■□□□□ 0.16
NIF3L1-205ENST00000409588 B4GALT5O43286 388 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 CD2BP2O95400 341 aaKnown RBP16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 NPTXRO95502 500 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 PRKCBP05771 671 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 COL9A1P20849 921 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 CA8P35219 290 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 MLH1P40692 756 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 MTHFRP42898 656 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 OR1G1P47890 313 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 AFF1P51825 1210 aaKnown RBP16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 CUL4AQ13619 759 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 IL17AQ16552 155 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 DCAF4L1Q3SXM0 396 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 SYCE2Q6PIF2 218 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 GSTCDQ8NEC7 633 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 RIPOR3Q96MK2 946 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 RPS6KC1Q96S38 1066 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 LRFN3Q9BTN0 628 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 PARP2Q9UGN5 583 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 NR2E1Q9Y466 385 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 HES2Q9Y543 173 aa16.02■□□□□ 0.16
NIF3L1-205ENST00000409588 LILRB3O75022 631 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 EFEMP2O95967 443 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 GUCY2CP25092 1073 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 VASPP50552 380 aaPredicted RBP16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 SCNN1GP51170 649 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 SMTNP53814 917 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 CREMQ03060 361 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 DMP1Q13316 513 aaPredicted RBP16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 GSE1Q14687 1217 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 ATAT1Q5SQI0 421 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 RINT1Q6NUQ1 792 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 CYP26C1Q6V0L0 522 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 C1orf186Q6ZWK4 172 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 RNF135Q8IUD6 432 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 SYT2Q8N9I0 419 aaPredicted RBP16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 SLC22A17Q8WUG5 538 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 HDAC7Q8WUI4 952 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 BSNDQ8WZ55 320 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 INTS4Q96HW7 963 aaKnown RBP16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 CDK5RAP3Q96JB5 506 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 ZFP42Q96MM3 310 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 NXF3Q9H4D5 531 aaKnown RBP16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 PDZD7Q9H5P4 517 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 MIOSQ9NXC5 875 aa16.01■□□□□ 0.15
NIF3L1-205ENST00000409588 E9PMD0 336 aa16■□□□□ 0.15
NIF3L1-205ENST00000409588 H0YCG3 227 aa16■□□□□ 0.15
NIF3L1-205ENST00000409588 URODP06132 367 aa16■□□□□ 0.15
NIF3L1-205ENST00000409588 THP07101 528 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms