RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CPNE8Q86YQ8 564 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 ASAP3Q8TDY4 903 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 SPIRE2Q8WWL2 714 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 CASKIN2Q8WXE0 1202 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 CTNNBL1Q8WYA6 563 aaPredicted RBP16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 NTPCRQ9BSD7 190 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 ATP6V0A4Q9HBG4 840 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 EPB41L5Q9HCM4 733 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 NOCTQ9UK39 431 aaKnown RBP16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 NFU1Q9UMS0 254 aa16.4■□□□□ 0.22
SCAMP4-202ENST00000409472 DGAT1O75907 488 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 AARSP49588 968 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 PPATQ06203 517 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 EMC2Q15006 297 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 EEPD1Q7L9B9 569 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 HES6Q96HZ4 224 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 FAM213AQ9BRX8 229 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 HAPLN2Q9GZV7 340 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 VIPAS39Q9H9C1 493 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 DONSONQ9NYP3 566 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 RNF14Q9UBS8 474 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 NR2E1Q9Y466 385 aa16.39■□□□□ 0.21
SCAMP4-202ENST00000409472 MAPK13O15264 365 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 RNF40O75150 1001 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 RFX1P22670 979 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 ALDH5A1P51649 535 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 CYP24A1Q07973 514 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 IFI16Q16666 785 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 GNPTABQ3T906 1256 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 FBXL18Q96ME1 805 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 IWS1Q96ST2 819 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 DDX47Q9H0S4 455 aaKnown RBP16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 GDF3Q9NR23 364 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 ARHGAP28Q9P2N2 729 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 EXOC7Q9UPT5 735 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 PTPRJQ12913 1337 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 IRF6O14896 467 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 P4HA2O15460 535 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 ZBTB41Q5SVQ8 909 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 AADACL2Q6P093 401 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 IFT81Q8WYA0 676 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 TATDN2Q93075 761 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 BICD1Q96G01 975 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 PCYT2Q99447 389 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 PAGR1Q9BTK6 254 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 CXorf56Q9H5V9 222 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 SUCLA2Q9P2R7 463 aaPredicted RBP16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 PPP2R3BQ9Y5P8 575 aa16.38■□□□□ 0.21
SCAMP4-202ENST00000409472 SOWAHBA6NEL2 793 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 DDX3YO15523 660 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 FTLP02792 175 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 MMEP08473 750 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 COPB2P35606 906 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 MARCKSL1P49006 195 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 CETN1Q12798 172 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 STXBP2Q15833 593 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 NAA35Q5VZE5 725 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 KRT39Q6A163 491 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 SCARA3Q6AZY7 606 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 GADL1Q6ZQY3 521 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 SV2AQ7L0J3 742 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 FAM71AQ8IYT1 594 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 MCPH1Q8NEM0 835 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 FAM71BQ8TC56 605 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 SCFD2Q8WU76 684 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ZNF516Q92618 1163 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 OTUD5Q96G74 571 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 MFSD14AQ96MC6 490 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 CEP89Q96ST8 783 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 PGRMC1O00264 195 aaKnown RBP16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 POLGP54098 1239 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 GSCP56915 257 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ERVK-9P63128 1117 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ZNF211Q13398 564 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 DRP2Q13474 957 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 MIS18BP1Q6P0N0 1132 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ACTRT1Q8TDG2 376 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 SHC3Q92529 594 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ALG3Q92685 438 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 HVCN1Q96D96 273 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ZBTB45Q96K62 511 aaPredicted RBP16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 TMEM8AQ9HCN3 771 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ZNF302Q9NR11 478 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 SIP14410 1827 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 MYPNQ86TC9 1320 aa16.37■□□□□ 0.21
SCAMP4-202ENST00000409472 ANKRD62A6NC57 917 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 CPP00450 1065 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 OATP04181 439 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 GUCY2FP51841 1108 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 EPHB4P54760 987 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 CORO7P57737 925 aa16.36■□□□□ 0.21
SCAMP4-202ENST00000409472 NLRP11P59045 1033 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms