RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 USP41Q3LFD5 358 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 Q4G0T1 1027 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 SLC44A4Q53GD3 710 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 FUT10Q6P4F1 479 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 ZNF579Q8NAF0 562 aaKnown RBP18.64■□□□□ 0.57
CHMP3-203ENST00000409225 PSPC1Q8WXF1 523 aaKnown RBP18.64■□□□□ 0.57
CHMP3-203ENST00000409225 SLC7A3Q8WY07 619 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 ZFP42Q96MM3 310 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 DDX23Q9BUQ8 820 aaKnown RBP18.64■□□□□ 0.57
CHMP3-203ENST00000409225 FNIP2Q9P278 1114 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 CDH7Q9ULB5 785 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 USP18Q9UMW8 372 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 PATJQ8NI35 1801 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 PRR5-ARHGAP8B1AHC4 643 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 ERLIN2O94905 339 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 C1RP00736 705 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 CD72P21854 359 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 ARHGAP8P85298 464 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 PRKCQQ04759 706 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 RABGGTAQ92696 567 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 BORCS6Q96GS4 357 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 CEP170P1Q96L14 293 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 ZSCAN32Q9NX65 697 aa18.63■□□□□ 0.57
CHMP3-203ENST00000409225 CPA1P15085 419 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 LMNB2Q03252 620 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 PRSS55Q6UWB4 352 aaPredicted RBP18.62■□□□□ 0.57
CHMP3-203ENST00000409225 MTSS1LQ765P7 747 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 RNF149Q8NC42 400 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 CPB2Q96IY4 423 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 MBOAT7Q96N66 472 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 KXD1Q9BQD3 176 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 SLC26A6Q9BXS9 759 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 LTB4R2Q9NPC1 389 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 DOCK6Q96HP0 2047 aa18.62■□□□□ 0.57
CHMP3-203ENST00000409225 EML1O00423 815 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 TSPAN1O60635 241 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 NLRP5P59047 1200 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 CREMQ03060 361 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 ST3GAL2Q16842 350 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 TSSK4Q6SA08 328 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 ZBTB44Q8NCP5 570 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 ETNPPLQ8TBG4 499 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 FGF13Q92913 245 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 RTKNQ9BST9 563 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 OSBPL6Q9BZF3 934 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 EPC1Q9H2F5 836 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 DHX33Q9H6R0 707 aaKnown RBP18.61■□□□□ 0.57
CHMP3-203ENST00000409225 ADAM28Q9UKQ2 775 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 POLIQ9UNA4 740 aa18.61■□□□□ 0.57
CHMP3-203ENST00000409225 TDRD15B5MCY1 1934 aaKnown RBP18.61■□□□□ 0.57
CHMP3-203ENST00000409225 CYP3A7-CYP3A51PA0A087WV96 503 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 CYP3A7P24462 503 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 MAGEA9P43362 315 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 QARSP47897 775 aaKnown RBP18.6■□□□□ 0.57
CHMP3-203ENST00000409225 KRT32Q14532 448 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 PPM1LQ5SGD2 360 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 LIN9Q5TKA1 542 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 NOTUMQ6P988 496 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 Q6ZUG5 572 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 ITFG1Q8TB96 612 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 BRF1Q92994 677 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 FBXW11Q9UKB1 542 aa18.6■□□□□ 0.57
CHMP3-203ENST00000409225 ZFHX4Q86UP3 3567 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 CCL16O15467 120 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 LILRB5O75023 590 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 TADA2AO75478 443 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 AXLP30530 894 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 RFC5P40937 340 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 PFKPQ01813 784 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 EMC2Q15006 297 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 TSGA10IPQ3SY00 556 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 RTP2Q5QGT7 225 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 ZBTB41Q5SVQ8 909 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 RSPO2Q6UXX9 243 aaPredicted RBP18.59■□□□□ 0.57
CHMP3-203ENST00000409225 TPRG1Q6ZUI0 275 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 FERMT3Q86UX7 667 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 EXOC8Q8IYI6 725 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 GPR65Q8IYL9 337 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 TCP11Q8WWU5 503 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 CCDC51Q96ER9 411 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 PHF20Q9BVI0 1012 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 RNF26Q9BY78 433 aaPredicted RBP18.59■□□□□ 0.57
CHMP3-203ENST00000409225 C22orf23Q9BZE7 217 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 TRIM6Q9C030 488 aaPredicted RBP18.59■□□□□ 0.57
CHMP3-203ENST00000409225 CSRNP2Q9H175 543 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
CHMP3-203ENST00000409225 NXF3Q9H4D5 531 aaKnown RBP18.59■□□□□ 0.57
CHMP3-203ENST00000409225 PARD6AQ9NPB6 346 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 WRAP73Q9P2S5 460 aaPredicted RBP18.59■□□□□ 0.57
CHMP3-203ENST00000409225 CACNG4Q9UBN1 327 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 GMEB2Q9UKD1 530 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 GIT1Q9Y2X7 761 aa18.59■□□□□ 0.57
CHMP3-203ENST00000409225 NID2Q14112 1375 aa18.58■□□□□ 0.57
CHMP3-203ENST00000409225 ASAP2O43150 1006 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 TBC1D4O60343 1298 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 C8AP07357 584 aa18.58■□□□□ 0.56
CHMP3-203ENST00000409225 HMGB1P09429 215 aaKnown RBP18.58■□□□□ 0.56
CHMP3-203ENST00000409225 HNRNPA1P09651 372 aaKnown RBP eCLIP18.58■□□□□ 0.56
CHMP3-203ENST00000409225 TGM1P22735 817 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms