RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CEP170P1Q96L14 293 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 DBNDD1Q9H9R9 158 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 PSMC3P17980 439 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 KCNQ4P56696 695 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 CLEC4FQ8N1N0 589 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 MTERF3Q96E29 417 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 UBE2TQ9NPD8 197 aaPredicted RBP15.55■□□□□ 0.08
CCDC50-201ENST00000392455 HDAC6Q9UBN7 1215 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 RBL2Q08999 1139 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 IMPAD1Q9NX62 359 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 PCDHA5Q9Y5H7 936 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 SLC4A7Q9Y6M7 1214 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 DYNLL1P63167 89 aaKnown RBP15.55■□□□□ 0.08
CCDC50-201ENST00000392455 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 ING3Q9NXR8 418 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 MAD2L2Q9UI95 211 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 PDE8BO95263 885 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 PRAMEP78395 509 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 COQ7Q99807 217 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 TRIM16LQ309B1 348 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 RWDD4Q6NW29 188 aaKnown RBP15.55■□□□□ 0.08
CCDC50-201ENST00000392455 CCDC149Q6ZUS6 474 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 OSBPL9Q96SU4 736 aa15.55■□□□□ 0.08
CCDC50-201ENST00000392455 NXF1Q9UBU9 619 aaKnown RBP15.55■□□□□ 0.08
CCDC50-201ENST00000392455 RGS12O14924 1447 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 LOC102724428A0A0B4J2F2 783 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 DYRK3O43781 588 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 SIK1P57059 783 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 C1DQ13901 141 aaKnown RBP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 COG2Q14746 738 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 HES6Q96HZ4 224 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 C6orf203Q9P0P8 240 aaPredicted RBP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 SMG5Q9UPR3 1016 aaKnown RBP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 GMNCA6NCL1 334 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 HNMTP50135 292 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 ZBED6P86452 979 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 C2orf54Q08AI8 447 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 NEK10Q6ZWH5 1172 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 KANSL1LA0AUZ9 987 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 FNTAP49354 379 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 MRPS25P82663 173 aaKnown RBP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 C19orf18Q8NEA5 215 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 ASIC4Q96FT7 647 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 RBBP8Q99708 897 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 PFASO15067 1338 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 POTEIP0CG38 1075 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 MARK3P27448 753 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 ZNF658Q5TYW1 1059 aaPredicted RBP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 EEPD1Q7L9B9 569 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 MB21D1Q8N884 522 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 SPACA6W5XKT8 324 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 FAM135BQ49AJ0 1406 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 MYCP01106 439 aaPredicted RBP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 CTTNQ14247 550 aaKnown RBP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 GPT2Q8TD30 523 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 TBCKQ8TEA7 893 aa15.54■□□□□ 0.08
CCDC50-201ENST00000392455 FTOQ9C0B1 505 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCDC50-201ENST00000392455 GFPT2O94808 682 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 AKAP5P24588 427 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 RGS2P41220 211 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 LLGL1Q15334 1064 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 LVRNQ6Q4G3 990 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 PARP9Q8IXQ6 854 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 IL17REQ8NFR9 667 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 MYO1CO00159 1063 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 PIK3CDO00329 1044 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 PSMD14O00487 310 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 KLHL2O95198 593 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 ITGAXP20702 1163 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 CUL4AQ13619 759 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 APOA5Q6Q788 366 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 FAM133AQ8N9E0 248 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 STRNO43815 780 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 H2AFYO75367 372 aaKnown RBP15.53■□□□□ 0.08
CCDC50-201ENST00000392455 CXCR5P32302 372 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 RXRGP48443 463 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 UBE3CQ15386 1083 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 RHPN2Q8IUC4 686 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 SLC35F6Q8N357 371 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 FAM167AQ96KS9 214 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 DNAJC7Q99615 494 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 A0A0B4J269 797 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 PER1O15534 1290 aaPredicted RBP15.53■□□□□ 0.08
CCDC50-201ENST00000392455 PDE9AO76083 593 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 TUBB3Q13509 450 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 PUS3Q9BZE2 481 aaKnown RBP15.53■□□□□ 0.08
CCDC50-201ENST00000392455 CACNA2D2Q9NY47 1150 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 GMEB1Q9Y692 573 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 TRIM24O15164 1050 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 HMOX2P30519 316 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 MRPS35P82673 323 aaKnown RBP15.53■□□□□ 0.08
CCDC50-201ENST00000392455 MTERF2Q49AM1 385 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 BFARQ9NZS9 450 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 MXI1P50539 228 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 SUPT20HL1Q3ZLR7 823 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 ERFEQ4G0M1 354 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 SYDE2Q5VT97 1194 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms