RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 AGPAT1Q99943 283 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 PARP4Q9UKK3 1724 aaKnown RBP14□□□□□ -0.17
PTPRN2-202ENST00000389416 MEIS2O14770 477 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 TRPA1O75762 1119 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 WEE2P0C1S8 567 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 TGFB3P10600 412 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 CPB1P15086 417 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 HSPA6P17066 643 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 RARRES1P49788 294 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 STRIP2Q9ULQ0 834 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 ATP8A1Q9Y2Q0 1164 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 SLITRK3O94933 977 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 SAT1P21673 171 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 BBOF1Q8ND07 529 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 CCDC110Q8TBZ0 833 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 PNMA5Q96PV4 448 aa14□□□□□ -0.17
PTPRN2-202ENST00000389416 CDKN2AIPQ9NXV6 580 aaPredicted RBP14□□□□□ -0.17
PTPRN2-202ENST00000389416 A0A087X0B3 334 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 ALDH3A1P30838 453 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 THPOP40225 353 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 NOP14P78316 857 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 PPIL2Q13356 520 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 ARL13BQ3SXY8 428 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 GLRA4Q5JXX5 417 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 GJB7Q6PEY0 223 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 C4orf50Q6ZRC1 276 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 DNAAF3Q8N9W5 541 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 P3H4Q92791 437 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 KLK14Q9P0G3 267 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 HDAC6Q9UBN7 1215 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 SPDYE16A6NNV3 312 aaPredicted RBP13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 POC1B-GALNT4F8VUJ3 575 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 SEC31AO94979 1220 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 NPTXRO95502 500 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 ATP11AP98196 1134 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 SGSM1Q2NKQ1 1148 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 NFRKBQ6P4R8 1299 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 ZNF384Q8TF68 577 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 EXTL3O43909 919 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 GYPCP04921 128 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 PHBP35232 272 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 EPC2Q52LR7 807 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 WDR18Q9BV38 432 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 DNAJC17Q9NVM6 304 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 SYNPO2Q9UMS6 1093 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 C17orf102A2RUQ5 167 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 MIF4GDA9UHW6 222 aaKnown RBP13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 FOXP2O15409 715 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 INSRRP14616 1297 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 KCNK18Q7Z418 384 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 RYBPQ8N488 228 aaPredicted RBP13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 TC2NQ8N9U0 490 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 SCFD1Q8WVM8 642 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 TRAPPC12Q8WVT3 735 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 HEY1Q9Y5J3 304 aa13.99□□□□□ -0.17
PTPRN2-202ENST00000389416 BNIP3LO60238 219 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ZBED1O96006 694 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 PNMA6AP0CW24 399 aaPredicted RBP13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ITGA4P13612 1032 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 TTI2Q6NXR4 508 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ZNF720Q7Z2F6 126 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 BBS5Q8N3I7 341 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 RBBP8NLQ8NC74 664 aaPredicted RBP13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 TNIP3Q96KP6 325 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 TMEM8AQ9HCN3 771 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ATRNO75882 1429 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ABCC6O95255 1503 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 GAS2O43903 313 aaKnown RBP13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 FGRP09769 529 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 PSMC4P43686 418 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 RGS7P49802 495 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 CCDC121Q6ZUS5 278 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 TTC39CQ8N584 583 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 CPA5Q8WXQ8 436 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ABHD16BQ9H3Z7 469 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 FAM114A2Q9NRY5 505 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ASNSD1Q9NWL6 643 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 MKRN1Q9UHC7 482 aaKnown RBP13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ANAPC5Q9UJX4 755 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 FNDC3AQ9Y2H6 1198 aaKnown RBP13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 GLTPD2A6NH11 291 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 NFKBIEO00221 500 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 SLC4A1P02730 911 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 MUTP22033 750 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 SCP2P22307 547 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ATP1A2P50993 1020 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 NOTUMQ6P988 496 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 ARHGEF18Q6ZSZ5 1173 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 RNF10Q8N5U6 811 aaKnown RBP13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 PLCB1Q9NQ66 1216 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 USP20Q9Y2K6 914 aa13.98□□□□□ -0.17
PTPRN2-202ENST00000389416 CYP2C19P33261 490 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 SLC18A3Q16572 532 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 KCTD16Q68DU8 428 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 GLB1LQ6UWU2 654 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 SH3BP5LQ7L8J4 393 aa13.97□□□□□ -0.17
PTPRN2-202ENST00000389416 RFFLQ8WZ73 363 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms