RNA–Protein interactions for RNA: ENST00000384559.1

RNU6-1235P-201, Transcript of RNA, U6 small nuclear 1235, pseudogene, humanhuman

BASIC

Gene RNU6-1235P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1235P-201ENST00000384559 SSBP3Q9BWW4 388 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1235P-201ENST00000384559 SLC12A5Q9H2X9 1139 aa2.66□□□□□ -1.98
RNU6-1235P-201ENST00000384559 SEC61A2Q9H9S3 476 aa2.66□□□□□ -1.98
RNU6-1235P-201ENST00000384559 DDX20Q9UHI6 824 aaKnown RBP2.66□□□□□ -1.98
RNU6-1235P-201ENST00000384559 RCAN3Q9UKA8 241 aa2.66□□□□□ -1.98
RNU6-1235P-201ENST00000384559 PNMA8BQ9ULN7 279 aaPredicted RBP2.66□□□□□ -1.98
RNU6-1235P-201ENST00000384559 NPEPPSL1A6NEC2 478 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 FAM171A2A8MVW0 826 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 VSTM5A8MXK1 200 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 FOXS1O43638 330 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 AP1G1O43747 822 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PHF2O75151 1096 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 OFD1O75665 1012 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 HMGB1P09429 215 aaKnown RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 GYPEP15421 78 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 SYN1P17600 705 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ATF3P18847 181 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CR2P20023 1033 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PCSK1P29120 753 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CYP2C19P33261 490 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 GUCY1A2P33402 732 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PTPN7P35236 360 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 MSX2P35548 267 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PER3P56645 1201 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 WNT3AP56704 352 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 DSC2Q02487 901 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ICAM4Q14773 271 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 SURF1Q15526 300 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 KRTAP19-4Q3LI73 84 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 MFSD14BQ5SR56 506 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 SLFN13Q68D06 897 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ANKS6Q68DC2 871 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 NXNQ6DKJ4 435 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 TCTN3Q6NUS6 607 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 MIGA2Q7L4E1 593 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 COL23A1Q86Y22 540 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 XYLT1Q86Y38 959 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 GRAMD1CQ8IYS0 662 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 MYO1HQ8N1T3 1032 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 DCBLD1Q8N8Z6 715 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 GIMAP8Q8ND71 665 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 TTC8Q8TAM2 541 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PPP1R35Q8TAP8 253 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 HPS3Q969F9 1004 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 HDAC10Q969S8 669 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CLIP3Q96DZ5 547 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 MVB12AQ96EY5 273 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 IL17RAQ96F46 866 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PAWRQ96IZ0 340 aaKnown RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 TMX3Q96JJ7 454 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 DMRTA2Q96SC8 542 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CDC5LQ99459 802 aaKnown RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 NUP88Q99567 741 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 C7orf25Q9BPX7 421 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 TCF25Q9BQ70 676 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 SENP6Q9GZR1 1112 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 KCNH6Q9H252 994 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 BCO1Q9HAY6 547 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 NMRK2Q9NPI5 230 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 RTEL1Q9NZ71 1219 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 SAP30BPQ9UHR5 308 aaKnown RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 AJAP1Q9UKB5 411 aaPredicted RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ZFR2Q9UPR6 939 aaKnown RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 RUVBL1Q9Y265 456 aaKnown RBP2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PCDHB1Q9Y5F3 818 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ACTL7AQ9Y615 435 aa2.65□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ATRNL1Q5VV63 1379 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 A6NNZ2 444 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CXorf49A8MYA2 514 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 NRP1O14786 923 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 GPR32O75388 356 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 RAD17O75943 681 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ENDOD1O94919 500 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ITGB3P05106 788 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 RAP2AP10114 183 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 HSPA6P17066 643 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 AKAP5P24588 427 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CRHR1P34998 444 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ALDH1A3P47895 512 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 GZMKP49863 264 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 NPEPPSP55786 919 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ZNF280AP59817 542 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 APBA1Q02410 837 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 FOXL1Q12952 345 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 MTM1Q13496 603 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 GRM7Q14831 915 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 NFIXQ14938 502 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CSRP2Q16527 193 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ZFYVE27Q5T4F4 411 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 AFMIDQ63HM1 303 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CXorf57Q6NSI4 855 aaKnown RBP2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 FAM111BQ6SJ93 734 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 TTLL10Q6ZVT0 673 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 USP45Q70EL2 814 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ZNF572Q7Z3I7 529 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 CIR1Q86X95 450 aaPredicted RBP2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 PRR18Q8N4B5 295 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 MB21D1Q8N884 522 aa2.64□□□□□ -1.99
RNU6-1235P-201ENST00000384559 ZBTB34Q8NCN2 500 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms