RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PFKFB2O60825 505 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 LYPLA2O95372 231 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 ARF4P18085 180 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-202ENST00000374426 ARL2P36404 184 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 TFDP1Q14186 410 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 CYP26C1Q6V0L0 522 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 SIX5Q8N196 739 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 GSTCDQ8NEC7 633 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 RSAD2Q8WXG1 361 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 TNFRSF25Q93038 417 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 ZNF707Q96C28 371 aaPredicted RBP15.34■□□□□ 0.05
CXCL12-202ENST00000374426 B3GALT6Q96L58 329 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 APOL6Q9BWW8 343 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 FBXL21Q9UKT6 434 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 GIT1Q9Y2X7 761 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 CLUHO75153 1309 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 DOCK8Q8NF50 2099 aa15.34■□□□□ 0.05
CXCL12-202ENST00000374426 B4GALT5O43286 388 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 DGAT1O75907 488 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 PAPLNO95428 1278 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
CXCL12-202ENST00000374426 SPATA31D3P0C874 917 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 FDPSP14324 419 aaKnown RBP15.33■□□□□ 0.04
CXCL12-202ENST00000374426 GLRA2P23416 452 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 GBP2P32456 591 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-202ENST00000374426 NCBP1Q09161 790 aaKnown RBP15.33■□□□□ 0.04
CXCL12-202ENST00000374426 SPATA31D4Q6ZUB0 917 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 CCDC105Q8IYK2 499 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 SMG7Q92540 1137 aaKnown RBP15.33■□□□□ 0.04
CXCL12-202ENST00000374426 STAMQ92783 540 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 MYADMQ96S97 322 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 NFKBIZQ9BYH8 718 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 GPR62Q9BZJ7 368 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 TRIM6Q9C030 488 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-202ENST00000374426 ANKEF1Q9NU02 776 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 EPS15L1Q9UBC2 864 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 ORC3Q9UBD5 711 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-202ENST00000374426 DPP7Q9UHL4 492 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 PCDHA12Q9UN75 941 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 DMXL1Q9Y485 3027 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 CACNA1AO00555 2505 aa15.33■□□□□ 0.04
CXCL12-202ENST00000374426 TGM5O43548 720 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 NR1I2O75469 434 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 AKAP5P24588 427 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 KRT2P35908 639 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 RARRES1P49788 294 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 FUT10Q6P4F1 479 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 ELMSAN1Q6PJG2 1045 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 CDR2LQ86X02 465 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-202ENST00000374426 PALB2Q86YC2 1186 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 HDAC7Q8WUI4 952 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 NKD2Q969F2 451 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-202ENST00000374426 RTP3Q9BQQ7 232 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 COLEC11Q9BWP8 271 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 PLEKHA4Q9H4M7 779 aa15.32■□□□□ 0.04
CXCL12-202ENST00000374426 TDRD15B5MCY1 1934 aaKnown RBP15.31■□□□□ 0.04
CXCL12-202ENST00000374426 A0A1B0GUA9 196 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 KRBA1A5PL33 1030 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 WNT7AO00755 349 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 C1RP00736 705 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 CFHP08603 1231 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 ANGPT1Q15389 498 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 CALCRLQ16602 461 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 USP41Q3LFD5 358 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 SLC27A1Q6PCB7 646 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 LILRA6Q6PI73 481 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 POTEGQ6S5H5 508 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 GPR65Q8IYL9 337 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 HACE1Q8IYU2 909 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 SLC44A3Q8N4M1 653 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 DTWD2Q8NBA8 298 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 PIGOQ8TEQ8 1089 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 WASF1Q92558 559 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 RABGGTAQ92696 567 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 NT5C3AQ9H0P0 336 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 TTC12Q9H892 705 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-202ENST00000374426 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.31■□□□□ 0.04
CXCL12-202ENST00000374426 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 FNIP2Q9P278 1114 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 CACNG4Q9UBN1 327 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 WNT16Q9UBV4 365 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 ADAM28Q9UKQ2 775 aa15.31■□□□□ 0.04
CXCL12-202ENST00000374426 A0A087WWV3 80 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 NPTXRO95502 500 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 RPL17P18621 184 aaKnown RBP15.3■□□□□ 0.04
CXCL12-202ENST00000374426 GRIK3Q13003 919 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 GLYCTKQ8IVS8 523 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 RIN2Q8WYP3 895 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-202ENST00000374426 PAAF1Q9BRP4 392 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 POLR3FQ9H1D9 316 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-202ENST00000374426 GPRC5CQ9NQ84 441 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 ZDHHC7Q9NXF8 308 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 ZMYM2Q9UBW7 1377 aa15.3■□□□□ 0.04
CXCL12-202ENST00000374426 NEMFO60524 1076 aa15.29■□□□□ 0.04
CXCL12-202ENST00000374426 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
CXCL12-202ENST00000374426 SRFP11831 508 aa15.29■□□□□ 0.04
CXCL12-202ENST00000374426 LAMP2P13473 410 aa15.29■□□□□ 0.04
CXCL12-202ENST00000374426 TXKP42681 527 aa15.29■□□□□ 0.04
CXCL12-202ENST00000374426 RTP2Q5QGT7 225 aa15.29■□□□□ 0.04
CXCL12-202ENST00000374426 NECAB1Q8N987 351 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms