RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PTPN14Q15678 1187 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 ATAT1Q5SQI0 421 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 ARL6IP4Q66PJ3 421 aaKnown RBP20.85■□□□□ 0.93
TMEM53-201ENST00000372235 CABP7Q86V35 215 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 RPGRIP1Q96KN7 1286 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 DRC1Q96MC2 740 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 APOL6Q9BWW8 343 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 NXF3Q9H4D5 531 aaKnown RBP20.85■□□□□ 0.93
TMEM53-201ENST00000372235 HES2Q9Y543 173 aa20.85■□□□□ 0.93
TMEM53-201ENST00000372235 SPDYE4A6NLX3 237 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 B4GALT5O43286 388 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 SLC26A4O43511 780 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 PRKCBP05771 671 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 KLRC2P26717 231 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 SCNN1GP51170 649 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 RBM10P98175 930 aaKnown RBP20.84■□□□□ 0.93
TMEM53-201ENST00000372235 DCAF4L1Q3SXM0 396 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 KIAA1841Q6NSI8 718 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 EDAQ92838 391 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 TBC1D32Q96NH3 1257 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 HERC2P3Q9BVR0 1158 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 RNF39Q9H2S5 420 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 C11orf16Q9NQ32 467 aa20.84■□□□□ 0.93
TMEM53-201ENST00000372235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.84■□□□□ 0.93
TMEM53-201ENST00000372235 BMP15O95972 392 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 ADH1AP07327 375 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 AFF1P51825 1210 aaKnown RBP20.83■□□□□ 0.93
TMEM53-201ENST00000372235 ATP2C1P98194 919 aaPredicted RBP20.83■□□□□ 0.93
TMEM53-201ENST00000372235 NBR1Q14596 966 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 MFSD14AQ96MC6 490 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 KCNH6Q9H252 994 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 SFXN1Q9H9B4 322 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 KCND2Q9NZV8 630 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 MUTYHQ9UIF7 546 aa20.83■□□□□ 0.93
TMEM53-201ENST00000372235 PRG3Q9Y2Y8 225 aaPredicted RBP20.83■□□□□ 0.93
TMEM53-201ENST00000372235 RBM19Q9Y4C8 960 aaKnown RBP20.83■□□□□ 0.93
TMEM53-201ENST00000372235 FAM86C2PA6NEL3 165 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 K7ERI5 159 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 AKAP5P24588 427 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 GLUD2P49448 558 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 DMP1Q13316 513 aaPredicted RBP20.82■□□□□ 0.92
TMEM53-201ENST00000372235 CYP26C1Q6V0L0 522 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 SLC22A17Q8WUG5 538 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 BCL7CQ8WUZ0 217 aaPredicted RBP20.82■□□□□ 0.92
TMEM53-201ENST00000372235 AK8Q96MA6 479 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 ZFP42Q96MM3 310 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 KLHL5Q96PQ7 755 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 CCDC113Q9H0I3 377 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 PDZD7Q9H5P4 517 aa20.82■□□□□ 0.92
TMEM53-201ENST00000372235 THP07101 528 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 TUSC3Q13454 348 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 ECM1Q16610 540 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 USP41Q3LFD5 358 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 LARP1BQ659C4 914 aaKnown RBP20.81■□□□□ 0.92
TMEM53-201ENST00000372235 PLCD3Q8N3E9 789 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 AUTS2Q8WXX7 1259 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 FAM122AQ96E09 287 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 CDK5RAP3Q96JB5 506 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 FBXL18Q96ME1 805 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 TMEM134Q9H6X4 195 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 ADAM28Q9UKQ2 775 aa20.81■□□□□ 0.92
TMEM53-201ENST00000372235 B4GALT3O60512 393 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 LILRB3O75022 631 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 TADA2AO75478 443 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 PDCP20941 246 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 CLCN4P51793 760 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 DSG1Q02413 1049 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 ELAVL2Q12926 359 aaKnown RBP20.8■□□□□ 0.92
TMEM53-201ENST00000372235 C15orf39Q6ZRI6 1047 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 BRAPQ7Z569 592 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 RNF168Q8IYW5 571 aaPredicted RBP20.8■□□□□ 0.92
TMEM53-201ENST00000372235 GSTCDQ8NEC7 633 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 HDAC7Q8WUI4 952 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 BSNDQ8WZ55 320 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 VN1R3Q9BXE9 311 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 MARCH5Q9NX47 278 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 MIOSQ9NXC5 875 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 USTQ9Y2C2 406 aa20.8■□□□□ 0.92
TMEM53-201ENST00000372235 SF3B1O75533 1304 aaKnown RBP eCLIP20.79■□□□□ 0.92
TMEM53-201ENST00000372235 CCDC169A6NNP5 214 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 SSBP05455 408 aaKnown RBP eCLIP20.79■□□□□ 0.92
TMEM53-201ENST00000372235 CNPP09543 421 aaKnown RBP20.79■□□□□ 0.92
TMEM53-201ENST00000372235 LIG1P18858 919 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 SCP2P22307 547 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 SMTNP53814 917 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 HYIQ5T013 277 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 RARS2Q5T160 578 aaKnown RBP20.79■□□□□ 0.92
TMEM53-201ENST00000372235 ATF7IP2Q5U623 682 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 PDXDC1Q6P996 788 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 BMP8AQ7Z5Y6 402 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 CDR2LQ86X02 465 aaPredicted RBP20.79■□□□□ 0.92
TMEM53-201ENST00000372235 APOL5Q9BWW9 433 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 RXFP1Q9HBX9 757 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 TOPORSQ9NS56 1045 aaPredicted RBP20.79■□□□□ 0.92
TMEM53-201ENST00000372235 CHST7Q9NS84 486 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 TNFSF13BQ9Y275 285 aa20.79■□□□□ 0.92
TMEM53-201ENST00000372235 E9PMD0 336 aa20.78■□□□□ 0.92
TMEM53-201ENST00000372235 H0YCG3 227 aa20.78■□□□□ 0.92
TMEM53-201ENST00000372235 EFEMP2O95967 443 aa20.78■□□□□ 0.92
TMEM53-201ENST00000372235 EPCAMP16422 314 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms