RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 RTKN2Q8IZC4 609 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 P3H4Q92791 437 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 EXT2Q93063 718 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 RPS6KC1Q96S38 1066 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.72□□□□□ -0.858e-8■□□□□ 10.9
SMARCA1-202ENST00000371122 ELP3Q9H9T3 547 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 KCNH7Q9NS40 1196 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 ARHGAP20Q9P2F6 1191 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 ZNF70Q9UC06 446 aaPredicted RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 PNMA2Q9UL42 364 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 GON4LQ3T8J9 2241 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 CFLARO15519 480 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 CTIFO43310 598 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 NR3C2P08235 984 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 SNX16P57768 344 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 IL9RQ01113 521 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 MUM1Q2TAK8 710 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 RBM43Q6ZSC3 357 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 PPP1R36Q96LQ0 422 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 EHD4Q9H223 541 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 ATP6V0A4Q9HBG4 840 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 LRRC4Q9HBW1 653 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 MRPL47Q9HD33 250 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 TOPORSQ9NS56 1045 aaPredicted RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 AGO2Q9UKV8 859 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 PCDHA10Q9Y5I2 948 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 MYO3BQ8WXR4 1341 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 A0A1B0GUA9 196 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 NFIBO00712 420 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 TPD52P55327 224 aaPredicted RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 PSMC1P62191 440 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 SLMAPQ14BN4 828 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 MMS22LQ6ZRQ5 1243 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 CBWD2Q8IUF1 395 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 ZBED8Q8IZ13 594 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 PPM1NQ8N819 430 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 KIAA0895Q8NCT3 520 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 FBXL13Q8NEE6 735 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 DHX38Q92620 1227 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 ARL8AQ96BM9 186 aa9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 PURBQ96QR8 312 aaKnown RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 RTFDC1Q9BY42 306 aaPredicted RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 TAF1DQ9H5J8 278 aaPredicted RBP9.72□□□□□ -0.85
SMARCA1-202ENST00000371122 H3BQF6 201 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 CREB3O43889 395 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 CPP00450 1065 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 GSTA1P08263 222 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 GSTA2P09210 222 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 ADORA2BP29275 332 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 PHBP35232 272 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 PMS2P54278 862 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 PSMC5P62195 406 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 PPP2R5EQ16537 467 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 KYNUQ16719 465 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 EP400NLQ6ZTU2 488 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 C4orf33Q8N1A6 199 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 AKT1S1Q96B36 256 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 RUNDC3BQ96NL0 473 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 ZIM3Q96PE6 472 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 AGPAT1Q99943 283 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 PITPNM3Q9BZ71 974 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 THAP2Q9H0W7 228 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 SNX25Q9H3E2 840 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 ZNF302Q9NR11 478 aa9.71□□□□□ -0.85
SMARCA1-202ENST00000371122 AKAP3O75969 853 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 GGPS1O95749 300 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 ZBED1O96006 694 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 PDGFRBP09619 1106 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 SEPT6Q14141 434 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 ALS2CLQ60I27 953 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 RWDD4Q6NW29 188 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 CCT6BQ92526 530 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 SIK2Q9H0K1 926 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 INTS13Q9NVM9 706 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 ALG6Q9Y672 507 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 RNF225M0QZC1 329 aaPredicted RBP9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 DPEP1P16444 411 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 COMTP21964 271 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 YY1P25490 414 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 YWHAEP62258 255 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 DGKZQ13574 1117 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 SNRNP35Q16560 246 aaKnown RBP9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 STRIP1Q5VSL9 837 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 MAP7D3Q8IWC1 876 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 LRRC43Q8N309 656 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 RFFLQ8WZ73 363 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 ATP2A3Q93084 1043 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 MTMR8Q96EF0 704 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 AGAP3Q96P47 875 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 SUDS3Q9H7L9 328 aaPredicted RBP9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 RNF181Q9P0P0 153 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 RNF14Q9UBS8 474 aa9.71□□□□□ -0.86
SMARCA1-202ENST00000371122 A6NNZ2 444 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 M0QYV0 167 aa9.7□□□□□ -0.86
SMARCA1-202ENST00000371122 PPFIA2O75334 1257 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms