RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 PYGMP11217 842 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 XRCC5P13010 732 aaKnown RBP20.04■□□□□ 0.8
PRDM1-202ENST00000369091 RASSF2P50749 326 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 SLC34A1Q06495 639 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 RFX8Q6ZV50 586 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 ZC3H3Q8IXZ2 948 aaKnown RBP20.04■□□□□ 0.8
PRDM1-202ENST00000369091 FAM163AQ96GL9 167 aaPredicted RBP20.04■□□□□ 0.8
PRDM1-202ENST00000369091 CCDC87Q9NVE4 849 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 RHBDL2Q9NX52 303 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 KLRF2D3W0D1 207 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 THAP12O43422 761 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 AKAP3O75969 853 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 LYNP07948 512 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 CASP4P49662 377 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 USP46P62068 366 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 CHRNDQ07001 517 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 SESTD1Q86VW0 696 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 GPBP1Q86WP2 473 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 WDR60Q8WVS4 1066 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 LRRC27Q9C0I9 530 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 TLE6Q9H808 572 aa20.04■□□□□ 0.8
PRDM1-202ENST00000369091 TRAFD1O14545 582 aaPredicted RBP20.03■□□□□ 0.8
PRDM1-202ENST00000369091 EXOC3O60645 756 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 PSMG1O95456 288 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 TTC4O95801 387 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 ANXA13P27216 316 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 MAGEA8P43361 318 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 PPP1R21Q6ZMI0 780 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 CYFIP1Q7L576 1253 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 MTDHQ86UE4 582 aaKnown RBP20.03■□□□□ 0.8
PRDM1-202ENST00000369091 CCDC125Q86Z20 511 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 CCDC65Q8IXS2 484 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 REXO1Q8N1G1 1221 aaKnown RBP20.03■□□□□ 0.8
PRDM1-202ENST00000369091 ETNK2Q9NVF9 386 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 STX8Q9UNK0 236 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 ANKRD36CQ5JPF3 1778 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 RASA4BC9J798 803 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 RASA4O43374 803 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 STAT1P42224 750 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 KIAA0825Q8IV33 1275 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 ZCRB1Q8TBF4 217 aaKnown RBP20.03■□□□□ 0.8
PRDM1-202ENST00000369091 DYDC2Q96IM9 177 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 ZSWIM1Q9BR11 485 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 VCX3BQ9H321 246 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 VCX3AQ9NNX9 186 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 UBN1Q9NPG3 1134 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 NINJ2Q9NZG7 142 aa20.03■□□□□ 0.8
PRDM1-202ENST00000369091 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 A0A1W2PRG0 241 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 MAP3K7O43318 606 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 DLATP10515 647 aaKnown RBP20.02■□□□□ 0.8
PRDM1-202ENST00000369091 LMNB1P20700 586 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 AP1B1Q10567 949 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 SEL1L2Q5TEA6 688 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 HS2ST1Q7LGA3 356 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 LCA5Q86VQ0 697 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 MCM9Q9NXL9 1143 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 ASIC3Q9UHC3 531 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 BLOC1S6Q9UL45 172 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 PCDHGA4Q9Y5G9 962 aa20.02■□□□□ 0.8
PRDM1-202ENST00000369091 ZNF142P52746 1687 aaPredicted RBP20.02■□□□□ 0.8
PRDM1-202ENST00000369091 KAT6BQ8WYB5 2073 aa20.02■□□□□ 0.79
PRDM1-202ENST00000369091 FAM47DPA6NHR8 397 aa20.02■□□□□ 0.79
PRDM1-202ENST00000369091 ATP6V1G1O75348 118 aa20.02■□□□□ 0.79
PRDM1-202ENST00000369091 ASMTLO95671 621 aa20.02■□□□□ 0.79
PRDM1-202ENST00000369091 KRT17Q04695 432 aa20.02■□□□□ 0.79
PRDM1-202ENST00000369091 C1orf54Q8WWF1 131 aa20.02■□□□□ 0.79
PRDM1-202ENST00000369091 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 PALM3A6NDB9 673 aaPredicted RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 HNRNPRO43390 633 aaKnown RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 TOM1O60784 492 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 GNA11P29992 359 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 SOX5P35711 763 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 EDRF1Q3B7T1 1238 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 NLRP9Q7RTR0 991 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 FRMD5Q7Z6J6 570 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 DGKHQ86XP1 1220 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 MYLK4Q86YV6 388 aaPredicted RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 UBL4BQ8N7F7 174 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 PPFIBP2Q8ND30 876 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 NCSTNQ92542 709 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 ZNF184Q99676 751 aaPredicted RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 NPHS2Q9NP85 383 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 BMP2KQ9NSY1 1161 aaPredicted RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 TNS2Q63HR2 1409 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 EDF1O60869 148 aaKnown RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 VPS41P49754 854 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 TMEM62Q0P6H9 643 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 MESDQ14696 234 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 DRAP1Q14919 205 aaPredicted RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 SIX1Q15475 284 aaPredicted RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 ACBD5Q5T8D3 534 aaPredicted RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 SLC44A5Q8NCS7 719 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 RBM17Q96I25 401 aaKnown RBP20.01■□□□□ 0.79
PRDM1-202ENST00000369091 ARL8BQ9NVJ2 186 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 LNPEPQ9UIQ6 1025 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 KIAA1024Q9UPX6 916 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 STRCQ7RTU9 1775 aa20.01■□□□□ 0.79
PRDM1-202ENST00000369091 KRT18P05783 430 aaKnown RBP20■□□□□ 0.79
PRDM1-202ENST00000369091 FGFR1P11362 822 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms