RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ARL6IP4Q66PJ3 421 aaKnown RBP21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 PPM1NQ8N819 430 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 C1orf54Q8WWF1 131 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 CDC23Q9UJX2 597 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 FOXN1O15353 648 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 TTI1O43156 1089 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 PHLDB3Q6NSJ2 640 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 RNF180Q86T96 592 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 TEX13BQ9BXU2 312 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 SMARCAD1Q9H4L7 1026 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 GLI2P10070 1586 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 MFSD4BQ5TF39 518 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 PID1Q7Z2X4 250 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 ZBTB18Q99592 522 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 ISCA1Q9BUE6 129 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 KIFC3Q9BVG8 833 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 SENP1Q9P0U3 644 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 CALB1P05937 261 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 ALDH1A3P47895 512 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 TMPRSS15P98073 1019 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 PGBD4Q96DM1 585 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 LSM7Q9UK45 103 aaKnown RBP21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 CA4P22748 312 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 KLRK1P26718 216 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 EPHX2P34913 555 aa21.53■■□□□ 1.04
CDC42BPB-201ENST00000361246 CDK17Q00537 523 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 DGKDQ16760 1214 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 PABPC5Q96DU9 382 aaKnown RBP21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 TRAPPC3O43617 180 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 LRG1P02750 347 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 CYP2C9P11712 490 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 ANKMY2Q8IV38 441 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 ALKQ9UM73 1620 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 RGL2O15211 777 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 SDE2Q6IQ49 451 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 PPP1R18Q6NYC8 613 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 DRC3Q9H069 523 aa21.52■■□□□ 1.04
CDC42BPB-201ENST00000361246 GTF2H3Q13889 308 aa21.52■■□□□ 1.03
CDC42BPB-201ENST00000361246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.52■■□□□ 1.03
CDC42BPB-201ENST00000361246 ZNF560Q96MR9 790 aa21.52■■□□□ 1.03
CDC42BPB-201ENST00000361246 RASGRF2O14827 1237 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 CTNND1O60716 968 aaKnown RBP21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 RAD51Q06609 339 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 TWF1Q12792 350 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 ATG16L1Q676U5 607 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 MRFAP1L1Q96HT8 127 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 YME1L1Q96TA2 773 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 COPEO14579 308 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 ATG4CQ96DT6 458 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 GOLGA8QA0A0J9YX86 632 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 GOLGA8OA6NCC3 632 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 GOLGA8NF8WBI6 632 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 ZSCAN9O15535 394 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 TBXAS1P24557 533 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 SLC15A2Q16348 729 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 CPB2Q96IY4 423 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 OSBPL3Q9H4L5 887 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 PRR12Q9ULL5 1215 aa21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 MAGEB10Q96LZ2 347 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPB-201ENST00000361246 TARBP1Q13395 1621 aaKnown RBP21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 ALDH7A1P49419 539 aaKnown RBP21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 FASTKD1Q53R41 847 aaKnown RBP21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 C12orf60Q5U649 245 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 PPP1R2P3Q6NXS1 205 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 FAM118BQ9BPY3 351 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 CDHR2Q9BYE9 1310 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 IKBKBO14920 756 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 ENDOD1O94919 500 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 TAL1P17542 331 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 BLVRAP53004 296 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 RCOR1Q9UKL0 485 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 ARHGAP31Q2M1Z3 1444 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 KCNN4O15554 427 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 PRKCEQ02156 737 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 KRT17Q04695 432 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 MTM1Q13496 603 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 CCDC197Q8NCU1 140 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 CRAMP1Q96RY5 1269 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 CPT1AP50416 773 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 AIPL1Q9NZN9 384 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 WEE2P0C1S8 567 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 COPS2P61201 443 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 CCHCR1Q8TD31 782 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 PI4K2AQ9BTU6 479 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 PLEKHG2Q9H7P9 1386 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 SPTLC1O15269 473 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 ZSCAN26Q16670 478 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 ZC2HC1CQ53FD0 456 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 CCDC33Q8N5R6 958 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 SLC26A7Q8TE54 656 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 MTMR4Q9NYA4 1195 aa21.5■■□□□ 1.03
CDC42BPB-201ENST00000361246 FAM205CA6NFA0 338 aa21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 E2F6O75461 281 aa21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 RFX8Q6ZV50 586 aa21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 APOL1O14791 398 aa21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 VTNP04004 478 aa21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 CEP55Q53EZ4 464 aa21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 ALG13Q9NP73 1137 aaKnown RBP21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 DONSONQ9NYP3 566 aa21.49■■□□□ 1.03
CDC42BPB-201ENST00000361246 CLTCL1P53675 1640 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms