RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 BAZ2BQ9UIF8 2168 aaKnown RBP8.12□□□□□ -1.11
C11orf54-202ENST00000354421 MSTNO14793 375 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 OPLAHO14841 1288 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 EDIL3O43854 480 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 USP17L8P0C7I0 530 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 ALADP13716 330 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 MMP13P45452 471 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 DRG2P55039 364 aaKnown RBP8.12□□□□□ -1.11
C11orf54-202ENST00000354421 CBLBQ13191 982 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 KRT79Q5XKE5 535 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 DUPD1Q68J44 220 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 ALKBH5Q6P6C2 394 aaKnown RBP8.12□□□□□ -1.11
C11orf54-202ENST00000354421 PEX26Q7Z412 305 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 KCNK18Q7Z418 384 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 ANKS4BQ8N8V4 417 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 CCDC63Q8NA47 563 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 GLIS3Q8NEA6 775 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 ATP8B4Q8TF62 1192 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 HES6Q96HZ4 224 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 AP1M1Q9BXS5 423 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 RAB17Q9H0T7 212 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 KCTD10Q9H3F6 313 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 R3HDMLQ9H3Y0 253 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 ADARB2Q9NS39 739 aaKnown RBP8.12□□□□□ -1.11
C11orf54-202ENST00000354421 MCM9Q9NXL9 1143 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 NAGPAQ9UK23 515 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 MINPP1Q9UNW1 487 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.12□□□□□ -1.11
C11orf54-202ENST00000354421 UTP11Q9Y3A2 253 aaKnown RBP8.12□□□□□ -1.11
C11orf54-202ENST00000354421 NCANO14594 1321 aa8.12□□□□□ -1.11
C11orf54-202ENST00000354421 DCDC2CA8MYV0 355 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 PPP1R12AO14974 1030 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 TTI1O43156 1089 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 CTNND1O60716 968 aaKnown RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 RPS6KA4O75676 772 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 H2AFZP0C0S5 128 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 ITGA4P13612 1032 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 TM4SF4P48230 202 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 PTENP60484 403 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 MAP3K10Q02779 954 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 PTK2Q05397 1052 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 ZNF268Q14587 947 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 E2F5Q15329 346 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 CLUL1Q15846 466 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 SPTY2D1Q68D10 685 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 HIBCHQ6NVY1 386 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 H2AFVQ71UI9 128 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 NT5DC3Q86UY8 548 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 RASAL3Q86YV0 1011 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 CCDC65Q8IXS2 484 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 REXO1Q8N1G1 1221 aaKnown RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 CEP120Q8N960 986 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 SNX29Q8TEQ0 813 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 ZC3H15Q8WU90 426 aaKnown RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 MYLIPQ8WY64 445 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 RSRC1Q96IZ7 334 aaKnown RBP8.11□□□□□ -1.11
C11orf54-202ENST00000354421 ADAM7Q9H2U9 754 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 EPB41L4BQ9H329 900 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 KCNMB3Q9NPA1 279 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 ZDHHC18Q9NUE0 388 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 AMACRQ9UHK6 382 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 PNMA2Q9UL42 364 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 CHD6Q8TD26 2715 aa8.11□□□□□ -1.11
C11orf54-202ENST00000354421 MYH7BA7E2Y1 1941 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 USP17L3A6NCW0 530 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 USP17L4A6NCW7 530 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 CCDC169A6NNP5 214 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 BACH1O14867 736 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 CETN3O15182 167 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 DDX3YO15523 660 aaKnown RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 CAND2O75155 1236 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 FLOT1O75955 427 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 AGTP01019 485 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 MMEP08473 750 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 TSPY3P0CV98 308 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 TSPY8P0CW00 308 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 FOSL2P15408 326 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 CHN1P15882 459 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 RASA1P20936 1047 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 GBP2P32456 591 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 IRX1P78414 480 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 ARID5AQ03989 594 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 PPP1R7Q15435 360 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 BTNL9Q6UXG8 535 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 USP17L1Q7RTZ2 530 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 FRMD5Q7Z6J6 570 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 ZNF444Q8N0Y2 327 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 MDM1Q8TC05 714 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 SLC10A4Q96EP9 437 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 DYNLL2Q96FJ2 89 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 FMO2Q99518 471 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 MOV10L1Q9BXT6 1211 aaKnown RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 TRIM6Q9C030 488 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 NSRP1Q9H0G5 558 aaKnown RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 PABPC3Q9H361 631 aaKnown RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 RIOX1Q9H6W3 641 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
C11orf54-202ENST00000354421 ZNF277Q9NRM2 450 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-202ENST00000354421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms