RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 HERC2P3Q9BVR0 1158 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 FOXP1Q9H334 677 aaPredicted RBP21.52■■□□□ 1.04
ITGA4-202ENST00000339307 SORCS3Q9UPU3 1222 aa21.52■■□□□ 1.04
ITGA4-202ENST00000339307 RBM25P49756 843 aaKnown RBP21.51■■□□□ 1.03
ITGA4-202ENST00000339307 PADI6Q6TGC4 694 aa21.51■■□□□ 1.03
ITGA4-202ENST00000339307 ACSF2Q96CM8 615 aaPredicted RBP21.51■■□□□ 1.03
ITGA4-202ENST00000339307 ASIC4Q96FT7 647 aa21.51■■□□□ 1.03
ITGA4-202ENST00000339307 PRMT7Q9NVM4 692 aaPredicted RBP21.51■■□□□ 1.03
ITGA4-202ENST00000339307 NOL7Q9UMY1 257 aaKnown RBP21.51■■□□□ 1.03
ITGA4-202ENST00000339307 A0A1B0GUA9 196 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 ADH1AP07327 375 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 CCT6AP40227 531 aaKnown RBP21.5■■□□□ 1.03
ITGA4-202ENST00000339307 MRE11P49959 708 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 HMGN5P82970 282 aaKnown RBP21.5■■□□□ 1.03
ITGA4-202ENST00000339307 DSC1Q08554 894 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 ELMSAN1Q6PJG2 1045 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 CCDC149Q6ZUS6 474 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 GPR149Q86SP6 731 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 GLYCTKQ8IVS8 523 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 PLCD3Q8N3E9 789 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 DEPTORQ8TB45 409 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 B3GALT6Q96L58 329 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 MAN1C1Q9NR34 630 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
ITGA4-202ENST00000339307 TDRD15B5MCY1 1934 aaKnown RBP21.49■■□□□ 1.03
ITGA4-202ENST00000339307 TEX28O15482 410 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 LILRB3O75022 631 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 TADA2AO75478 443 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 BRD1O95696 1058 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 SPATA31D3P0C874 917 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 RPA1P27694 616 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 PRPF4BQ13523 1007 aaKnown RBP21.49■■□□□ 1.03
ITGA4-202ENST00000339307 NBR1Q14596 966 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 HAUS3Q68CZ6 603 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 SPATA31D4Q6ZUB0 917 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 PALB2Q86YC2 1186 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 NOSTRINQ8IVI9 506 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 UBALD2Q8IYN6 164 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 PRSS33Q8NF86 280 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 FBXO18Q8NFZ0 1043 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 C2orf40Q9H1Z8 148 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 SMOC2Q9H3U7 446 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 POLD4Q9HCU8 107 aa21.49■■□□□ 1.03
ITGA4-202ENST00000339307 TRIOO75962 3097 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 INPPL1O15357 1258 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 GLUD1P00367 558 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 PDGFBP01127 241 aaPredicted RBP21.48■■□□□ 1.03
ITGA4-202ENST00000339307 VCPP55072 806 aaKnown RBP21.48■■□□□ 1.03
ITGA4-202ENST00000339307 GRIK3Q13003 919 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 ORC2Q13416 577 aaPredicted RBP21.48■■□□□ 1.03
ITGA4-202ENST00000339307 MAPK6Q16659 721 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 ZDHHC14Q8IZN3 488 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 PRIMPOLQ96LW4 560 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 SH2B1Q9NRF2 756 aaPredicted RBP21.48■■□□□ 1.03
ITGA4-202ENST00000339307 LRWD1Q9UFC0 647 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 DPP7Q9UHL4 492 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 USP20Q9Y2K6 914 aa21.48■■□□□ 1.03
ITGA4-202ENST00000339307 CCDC195A0A1B0GUA6 201 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 N4BP3O15049 544 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 PRKCBP05771 671 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 CYP11B2P19099 503 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 PTPN5P54829 565 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 KIAA0319Q5VV43 1072 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 FUT10Q6P4F1 479 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 OTOP3Q7RTS5 596 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 RIN2Q8WYP3 895 aaPredicted RBP21.47■■□□□ 1.03
ITGA4-202ENST00000339307 BSNDQ8WZ55 320 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 IFT74Q96LB3 600 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 PRRX2Q99811 253 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 ADPGKQ9BRR6 497 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 SNTG2Q9NY99 539 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 CACNG4Q9UBN1 327 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 USTQ9Y2C2 406 aa21.47■■□□□ 1.03
ITGA4-202ENST00000339307 AVPR2P30518 371 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 DSG1Q02413 1049 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 USP41Q3LFD5 358 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 CDCA2Q69YH5 1023 aaPredicted RBP21.46■■□□□ 1.03
ITGA4-202ENST00000339307 PPP4R3CPQ6ZMV5 832 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 GSTCDQ8NEC7 633 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 HASPINQ8TF76 798 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 GPR62Q9BZJ7 368 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 BHMT2Q9H2M3 363 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 MFSD1Q9H3U5 465 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 FZD8Q9H461 694 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 PIDD1Q9HB75 910 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 ADAM28Q9UKQ2 775 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 KIAA1024Q9UPX6 916 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 MYO10Q9HD67 2058 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 CASTOR2A6NHX0 329 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 TTLL13PA6NNM8 815 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 NAMPTP43490 491 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 PPP2R5AQ15172 486 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 CEP57Q86XR8 500 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 KIFC3Q9BVG8 833 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 PDZD7Q9H5P4 517 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 GDAQ9Y2T3 454 aa21.46■■□□□ 1.03
ITGA4-202ENST00000339307 ZNF318Q5VUA4 2279 aa21.45■■□□□ 1.02
ITGA4-202ENST00000339307 RPL17P18621 184 aaKnown RBP21.45■■□□□ 1.02
ITGA4-202ENST00000339307 GBP2P32456 591 aaPredicted RBP21.45■■□□□ 1.02
ITGA4-202ENST00000339307 TRAPPC10P48553 1259 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms