RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 IRGCQ6NXR0 463 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 CDKL2Q92772 493 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 MED10Q9BTT4 135 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 SLITRK6Q9H5Y7 841 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 K7ERI5 159 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 ADCY3O60266 1144 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 IFI35P80217 286 aaPredicted RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 QRICH1Q2TAL8 776 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 C11orf91Q3C1V1 193 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 EEPD1Q7L9B9 569 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 FAM81BQ96LP2 452 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 EBF2Q9HAK2 575 aa17.07■□□□□ 0.32
NPHP3-201ENST00000337331 DDX18Q9NVP1 670 aaKnown RBP17.07■□□□□ 0.32
NPHP3-201ENST00000337331 A6NJR5 290 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 PDE5AO76074 875 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 RPS6KA2Q15349 733 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 MTMR8Q96EF0 704 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 CFAP57Q96MR6 1250 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 GDF3Q9NR23 364 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 ANAPC7Q9UJX3 599 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 COL15A1P39059 1388 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 MIF4GDA9UHW6 222 aaKnown RBP17.06■□□□□ 0.32
NPHP3-201ENST00000337331 COPB2P35606 906 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 PTDSS1P48651 473 aaKnown RBP17.06■□□□□ 0.32
NPHP3-201ENST00000337331 C12orf60Q5U649 245 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 TRIML2Q8N7C3 387 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 XXYLT1Q8NBI6 393 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 EPS8L3Q8TE67 593 aaKnown RBP17.06■□□□□ 0.32
NPHP3-201ENST00000337331 CDHR1Q96JP9 859 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 FAM20AQ96MK3 541 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 PHF20Q9BVI0 1012 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 ADAM33Q9BZ11 813 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 CNOT8Q9UFF9 292 aaKnown RBP17.06■□□□□ 0.32
NPHP3-201ENST00000337331 M0QZ92 97 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 PODXLO00592 558 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 ATP6V1C1P21283 382 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 STAT3P40763 770 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 IRX4P78413 519 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 KCNMA1Q12791 1236 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 NANOGNBQ7Z5D8 188 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 FAM160B2Q86V87 743 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 ADSSL1Q8N142 457 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
NPHP3-201ENST00000337331 APOL6Q9BWW8 343 aa17.06■□□□□ 0.32
NPHP3-201ENST00000337331 TDRD3Q9H7E2 651 aaKnown RBP17.06■□□□□ 0.32
NPHP3-201ENST00000337331 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 MCF2LO15068 1137 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 MT-ND3P03897 115 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 NCALDP61601 193 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 SPARCL1Q14515 664 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 KBTBD12Q3ZCT8 623 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 ERMARDQ5T6L9 678 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 ZNF746Q6NUN9 644 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 CD302Q8IX05 232 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 WDR60Q8WVS4 1066 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 DMAP1Q9NPF5 467 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 BCAP29Q9UHQ4 241 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 SARSP49591 514 aaKnown RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 GABPAQ06546 454 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 MCL1Q07820 350 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 SCG3Q8WXD2 468 aaKnown RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 MPP4Q96JB8 637 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 DNAAF2Q9NVR5 837 aaKnown RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 ATXN10Q9UBB4 475 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 PTPRMP28827 1452 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 F5H6K3 240 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 KLRC3Q07444 240 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 STK4Q13043 487 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 OLFML1Q6UWY5 402 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 PDZD4Q76G19 769 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 ZBTB33Q86T24 672 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 GRAMD1AQ96CP6 724 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 SCYL1Q96KG9 808 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 HEMGNQ9BXL5 484 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 QTRT2Q9H974 415 aaKnown RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 CSF1RP07333 972 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 MMP10P09238 476 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 PGM1P36871 562 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 IFRD2Q12894 506 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 DRAP1Q14919 205 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 PDIA6Q15084 440 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 ZNF394Q53GI3 561 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 MAP3K21Q5TCX8 1036 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 GLYCTKQ8IVS8 523 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 HACE1Q8IYU2 909 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 C7orf31Q8N865 590 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 ANKRD36BP1Q96IX9 119 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 RXFP1Q9HBX9 757 aa17.05■□□□□ 0.32
NPHP3-201ENST00000337331 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.05■□□□□ 0.32
NPHP3-201ENST00000337331 DYTNA2CJ06 578 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 ENTPD5O75356 428 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 CRKP46108 304 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 ALCAMQ13740 583 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms