RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NUDT18Q6ZVK8 323 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 CD274Q9NZQ7 290 aa17.31■□□□□ 0.36
PTCH1-201ENST00000331920 TRPM2O94759 1503 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 PCSK7Q16549 785 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 TOGARAM2Q6ZUX3 1019 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 OR8H2Q8N162 312 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 FAM129AQ9BZQ8 928 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 CARD9Q9H257 536 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
PTCH1-201ENST00000331920 PEX1O43933 1283 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 MAGEA9P43362 315 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 RABGAP1LQ5R372 815 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 BBS7Q8IWZ6 715 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 KIFC1Q9BW19 673 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.3■□□□□ 0.36
PTCH1-201ENST00000331920 ARMC6Q6NXE6 501 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 CEP95Q96GE4 821 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 SCN3BQ9NY72 215 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 SPASTQ9UBP0 616 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 PPIEQ9UNP9 301 aaKnown RBP17.3■□□□□ 0.36
PTCH1-201ENST00000331920 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
PTCH1-201ENST00000331920 CLMNQ96JQ2 1002 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 MARCOQ9UEW3 520 aaPredicted RBP17.3■□□□□ 0.36
PTCH1-201ENST00000331920 HNRNPH2P55795 449 aaKnown RBP17.3■□□□□ 0.36
PTCH1-201ENST00000331920 GFPT1Q06210 699 aaPredicted RBP17.3■□□□□ 0.36
PTCH1-201ENST00000331920 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 LATS2Q9NRM7 1088 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 C16orf96A6NNT2 1141 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 P4HA2O15460 535 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 CDC25BP30305 580 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 PIGSQ96S52 555 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 USP21Q9UK80 565 aa17.3■□□□□ 0.36
PTCH1-201ENST00000331920 HIST1H2AGP0C0S8 130 aaPredicted RBP17.29■□□□□ 0.36
PTCH1-201ENST00000331920 HIST1H2ADP20671 130 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 ABCE1P61221 599 aaKnown RBP17.29■□□□□ 0.36
PTCH1-201ENST00000331920 DMPKQ09013 629 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 CDHR1Q96JP9 859 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 HIST1H2AHQ96KK5 128 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 HIST1H2AJQ99878 128 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 H2AFJQ9BTM1 129 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 RAD17O75943 681 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 SLC44A2Q8IWA5 706 aaPredicted RBP17.29■□□□□ 0.36
PTCH1-201ENST00000331920 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
PTCH1-201ENST00000331920 HMBSP08397 361 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 GNAT1P11488 350 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 RALGDSQ12967 914 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 ITPRIPL1Q6GPH6 555 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
PTCH1-201ENST00000331920 CHAMP1Q96JM3 812 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 SLC52A2Q9HAB3 445 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 PSD3Q9NYI0 1048 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 RWDD2AQ9UIY3 292 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 PIPSLA2A3N6 862 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 SCFD1Q8WVM8 642 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 FRMD6Q96NE9 622 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 APOL5Q9BWW9 433 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 MUC3BQ9H195 1237 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 KLHL11Q9NVR0 708 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 GMNCA6NCL1 334 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 EIF2S1P05198 315 aaKnown RBP17.29■□□□□ 0.36
PTCH1-201ENST00000331920 PLIN5Q00G26 463 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 SUPT20HL1Q3ZLR7 823 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 FUT11Q495W5 492 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 DDI2Q5TDH0 399 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 ATP11CQ8NB49 1132 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 AK8Q96MA6 479 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 USP19O94966 1318 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 ERBB3P21860 1342 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 RAD51Q06609 339 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 C11orf57Q6ZUT1 292 aaPredicted RBP17.29■□□□□ 0.36
PTCH1-201ENST00000331920 EXOC4Q96A65 974 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 OMA1Q96E52 524 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 FAM213AQ9BRX8 229 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 GOLPH3LQ9H4A5 285 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 IMPAD1Q9NX62 359 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 DCDC2Q9UHG0 476 aa17.29■□□□□ 0.36
PTCH1-201ENST00000331920 BRAFP15056 766 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 EFHC2Q5JST6 749 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 MICU2Q8IYU8 434 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 RTL3Q8N8U3 475 aaKnown RBP17.28■□□□□ 0.36
PTCH1-201ENST00000331920 KCNN4O15554 427 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 NCAPHQ15003 741 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 HDHD2Q9H0R4 259 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 PCDHGA4Q9Y5G9 962 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 AOX1Q06278 1338 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 TCP11X1B4DZS4 312 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 ERAP2Q6P179 960 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 GFM2Q969S9 779 aaKnown RBP17.28■□□□□ 0.36
PTCH1-201ENST00000331920 CCT7Q99832 543 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 AIM2O14862 343 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 FGFR4P22455 802 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 CDC16Q13042 620 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 BEST2Q8NFU1 509 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 UBAP1Q9NZ09 502 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 CHRNDQ07001 517 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 COPRSQ9NQ92 184 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms