RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 MAP7Q14244 749 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.49■□□□□ 0.39
SFXN1-201ENST00000321442 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
SFXN1-201ENST00000321442 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 AKAP12Q02952 1782 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 TMEM191BP0C7N4 346 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 TRIM55Q9BYV6 548 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 ZWILCHQ9H900 591 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 MAGED2Q9UNF1 606 aaPredicted RBP17.49■□□□□ 0.39
SFXN1-201ENST00000321442 PI4K2BG5E9Z4 385 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 EPHB6O15197 1021 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 MAP3K7O43318 606 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 CA8P35219 290 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 CALR3Q96L12 384 aaKnown RBP17.49■□□□□ 0.39
SFXN1-201ENST00000321442 TMBIM4Q9HC24 238 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 KLHL11Q9NVR0 708 aa17.49■□□□□ 0.39
SFXN1-201ENST00000321442 REXO2Q9Y3B8 237 aaKnown RBP17.49■□□□□ 0.39
SFXN1-201ENST00000321442 TOM1L1O75674 476 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 POLR2BP30876 1174 aaKnown RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 HOXA7P31268 230 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 CASP4P49662 377 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 RNASELQ05823 741 aaKnown RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 ZBED8Q8IZ13 594 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 FAM20AQ96MK3 541 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 KITP10721 976 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 COMTP21964 271 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 GPS1Q13098 491 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 TTMPQ5BVD1 217 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 IZUMO3Q5VZ72 239 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 EPS8L3Q8TE67 593 aaKnown RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 IFT122Q9HBG6 1241 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 STOML1Q9UBI4 398 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 NOD1Q9Y239 953 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 KIF1AQ12756 1690 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 FMO5P49326 533 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 AP3B2Q13367 1082 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 VCPKMTQ9H867 229 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 CHD2O14647 1828 aaKnown RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 SLIT3O75094 1523 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 TFAMQ00059 246 aaKnown RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 CDR2Q01850 454 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 LMBRD2Q68DH5 695 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 DCAF4Q8WV16 495 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 DDX20Q9UHI6 824 aaKnown RBP17.48■□□□□ 0.39
SFXN1-201ENST00000321442 HACL1Q9UJ83 578 aa17.48■□□□□ 0.39
SFXN1-201ENST00000321442 NDC80O14777 642 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 BIRC2Q13490 618 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 SMAD1Q15797 465 aaKnown RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 PRPF38AQ8NAV1 312 aaKnown RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 STK33Q9BYT3 514 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 RSPH10B2B2RC85 870 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 RSPH10BP0C881 870 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 TMPRSS15P98073 1019 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 EPC2Q52LR7 807 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 NBPF12Q5TAG4 269 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 ZNF571Q7Z3V5 609 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 TRIM11Q96F44 468 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 APOL6Q9BWW8 343 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 THAP2Q9H0W7 228 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 SYNJ2BP-COX16A0A087WUM0 186 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 TULP2O00295 520 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 TPD52P55327 224 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 AMPD2Q01433 879 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 SLC20A2Q08357 652 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 GRAMD1BQ3KR37 738 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 SYCP2LQ5T4T6 812 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 TMEM270Q6UE05 265 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 GLIS3Q8NEA6 775 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 PABPC3Q9H361 631 aaKnown RBP17.47■□□□□ 0.39
SFXN1-201ENST00000321442 COX16Q9P0S2 106 aa17.47■□□□□ 0.39
SFXN1-201ENST00000321442 KIF1CO43896 1103 aaKnown RBP17.46■□□□□ 0.39
SFXN1-201ENST00000321442 TRPA1O75762 1119 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
SFXN1-201ENST00000321442 MTMR1Q13613 665 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 CAVIN3Q969G5 261 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 C18orf8Q96DM3 657 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 CFAP36Q96G28 342 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 APEX2Q9UBZ4 518 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 L3MBTL1Q9Y468 752 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 INO80B-WBP1J3KQ70 363 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 HAUS5O94927 633 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 SRGAP2CP0DJJ0 459 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 PDIA2Q13087 525 aaKnown RBP17.46■□□□□ 0.39
SFXN1-201ENST00000321442 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 DARS2Q6PI48 645 aaKnown RBP17.46■□□□□ 0.39
SFXN1-201ENST00000321442 NUDT12Q9BQG2 462 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 INO80BQ9C086 356 aaPredicted RBP17.46■□□□□ 0.39
SFXN1-201ENST00000321442 SMYD3Q9H7B4 428 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 HERC5Q9UII4 1024 aaKnown RBP17.46■□□□□ 0.39
SFXN1-201ENST00000321442 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.39
SFXN1-201ENST00000321442 SCP2P22307 547 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms