RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 PPM1NQ8N819 430 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 HIPK4Q8NE63 616 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 HDAC11Q96DB2 347 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 SLC9A2Q9UBY0 812 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 TLK1Q9UKI8 766 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 PITPNM2Q9BZ72 1349 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 TCP11X1B4DZS4 312 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 KITP10721 976 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 COMTP21964 271 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 HHIPL2Q6UWX4 724 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 JAMLQ86YT9 394 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 TTC13Q8NBP0 860 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 TTC25Q96NG3 672 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ECT2Q9H8V3 914 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ETNK1Q9HBU6 452 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 RPAINQ86UA6 219 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 RUSC1Q9BVN2 902 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ANKZF1Q9H8Y5 726 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 HOXC10Q9NYD6 342 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ALG6Q9Y672 507 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 SMIM22K7EJ46 135 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 EPC2Q52LR7 807 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ENOSF1Q7L5Y1 443 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 PSD3Q9NYI0 1048 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ZFP69BQ9UJL9 534 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 C9orf72Q96LT7 481 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 LRRC37BQ96QE4 947 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 ARHGAP20Q9P2F6 1191 aa18.32■□□□□ 0.52
GABRB3-202ENST00000311550 DMGDHQ9UI17 866 aaKnown RBP18.32■□□□□ 0.52
GABRB3-202ENST00000311550 CCDC195A0A1B0GUA6 201 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 MYBL1P10243 752 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 SYCP2LQ5T4T6 812 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 ATG16L1Q676U5 607 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 SPOPLQ6IQ16 392 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 DNAAF5Q86Y56 855 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 ANKMY2Q8IV38 441 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 FBXO41Q8TF61 875 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 ASNSD1Q9NWL6 643 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 STRIP2Q9ULQ0 834 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 BAZ2BQ9UIF8 2168 aaKnown RBP18.31■□□□□ 0.52
GABRB3-202ENST00000311550 GYG2O15488 501 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 TFDP2Q14188 446 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 TMEM143Q96AN5 459 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 TMEM117Q9H0C3 514 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 CCDC68Q9H2F9 335 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 NR1H3Q13133 447 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 MTMR2Q13614 643 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 WDR93Q6P2C0 686 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 PARP9Q8IXQ6 854 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 CASKIN2Q8WXE0 1202 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 ALG13Q9NP73 1137 aaKnown RBP18.31■□□□□ 0.52
GABRB3-202ENST00000311550 MSH4O15457 936 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 ANXA13P27216 316 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 SYN2Q92777 582 aaPredicted RBP18.31■□□□□ 0.52
GABRB3-202ENST00000311550 ISCUQ9H1K1 167 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 NAGPAQ9UK23 515 aa18.31■□□□□ 0.52
GABRB3-202ENST00000311550 LRIG3Q6UXM1 1119 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 ATL2Q8NHH9 583 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 TUBB6Q9BUF5 446 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 KLC4Q9NSK0 619 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 EIF4E1BA6NMX2 242 aaKnown RBP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 CFLARO15519 480 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 TMEM253P0C7T8 217 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 PAPD7Q5XG87 772 aaKnown RBP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 CRLF3Q8IUI8 442 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 Q9H521 79 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 HSPA9P38646 679 aaKnown RBP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 CASP4P49662 377 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 HMGCS2P54868 508 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 NT5DC1Q5TFE4 455 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 ZC3H18Q86VM9 953 aaKnown RBP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 TBX2Q13207 712 aaPredicted RBP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 KLHL38Q2WGJ6 581 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 JPH1Q9HDC5 661 aaPredicted RBP18.3■□□□□ 0.52
GABRB3-202ENST00000311550 IL17RBQ9NRM6 502 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 PARVAQ9NVD7 372 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 HAUS2Q9NVX0 235 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 NFIAQ12857 509 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 NBPF9Q3BBW0 867 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 TPCN2Q8NHX9 752 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 PIM2Q9P1W9 311 aa18.3■□□□□ 0.52
GABRB3-202ENST00000311550 SLC4A1P02730 911 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 SRGAP2BP0DMP2 458 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 FAM167AQ96KS9 214 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 THAP2Q9H0W7 228 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 GOLGA8RI6L899 631 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 PON1P27169 355 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 SEPT6Q14141 434 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 PI4K2AQ9BTU6 479 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 ACAD9Q9H845 621 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 PPP1R9AQ9ULJ8 1098 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
GABRB3-202ENST00000311550 CNTNAP4Q9C0A0 1308 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 MAP3K7O43318 606 aa18.29■□□□□ 0.52
GABRB3-202ENST00000311550 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
GABRB3-202ENST00000311550 CENPPQ6IPU0 288 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms