RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PEX5P50542 639 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 SLC29A2Q14542 456 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 TNIP1Q15025 636 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 PSMD1Q99460 953 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 GRHL1Q9NZI5 618 aa16.27■□□□□ 0.2
CSDC2-201ENST00000306149 ASTN2O75129 1339 aaPredicted RBP16.27■□□□□ 0.19
CSDC2-201ENST00000306149 SPOPO43791 374 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 RASA3Q14644 834 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 CLUL1Q15846 466 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 XKR9Q5GH70 373 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 CCDC137Q6PK04 289 aaKnown RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 ARMC9Q7Z3E5 817 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 LARGE2Q8N3Y3 721 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 NUP85Q9BW27 656 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 DDX20Q9UHI6 824 aaKnown RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 PHF2O75151 1096 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 RFX1P22670 979 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 SLCO1A2P46721 670 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 GTF2BQ00403 316 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 FMO1Q01740 532 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 MYBPC2Q14324 1141 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 SNRNP35Q16560 246 aaKnown RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 NBPF9Q3BBW0 867 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 FAM71AQ8IYT1 594 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 TLCD1Q96CP7 247 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 FGFR4P22455 802 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 C11orf63Q6NUN7 778 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 CCDC13Q8IYE1 715 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 ZNF564Q8TBZ8 553 aaPredicted RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 NEK9Q8TD19 979 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 SYTL5Q8TDW5 730 aaPredicted RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 ZNF653Q96CK0 615 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 PI4K2AQ9BTU6 479 aa16.26■□□□□ 0.19
CSDC2-201ENST00000306149 CNOT10Q9H9A5 744 aaKnown RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 ACTR5Q9H9F9 607 aaPredicted RBP16.26■□□□□ 0.19
CSDC2-201ENST00000306149 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 FAM187AA6NFU0 413 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 SORBS3O60504 671 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 CCNE2O96020 404 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 RPS6P62753 249 aaKnown RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 IFI35P80217 286 aaPredicted RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 DHX34Q14147 1143 aaKnown RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 SPRED3Q2MJR0 410 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 C2CD6Q53TS8 623 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 CCDC105Q8IYK2 499 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 TAS1R2Q8TE23 839 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 TATDN2Q93075 761 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 GMLQ99445 158 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 PABPC3Q9H361 631 aaKnown RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 DBR1Q9UK59 544 aaKnown RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 UBIAD1Q9Y5Z9 338 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 RPTORQ8N122 1335 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 TESPA1A2RU30 521 aaPredicted RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 MIF4GDA9UHW6 222 aaKnown RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 DLATP10515 647 aaKnown RBP16.25■□□□□ 0.19
CSDC2-201ENST00000306149 SEL1L2Q5TEA6 688 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 CCDC25Q86WR0 208 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 USP20Q9Y2K6 914 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 TELO2Q9Y4R8 837 aa16.25■□□□□ 0.19
CSDC2-201ENST00000306149 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
CSDC2-201ENST00000306149 ATP2C2O75185 946 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 RARAP10276 462 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 CNGA1P29973 690 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 SMTNP53814 917 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 HADHBP55084 474 aaKnown RBP16.24■□□□□ 0.19
CSDC2-201ENST00000306149 DENND2CQ68D51 928 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 CCDC121Q6ZUS5 278 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 HOOK3Q86VS8 718 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 SELENOSQ9BQE4 189 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 TRIM7Q9C029 511 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 AZI2Q9H6S1 392 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.24■□□□□ 0.19
CSDC2-201ENST00000306149 TCEAL9Q9UHQ7 104 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 RASAL2Q9UJF2 1139 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 PLA2G6O60733 806 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 NUDT17P0C025 328 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 CYP11B1P15538 503 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 CHRNA3P32297 505 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 MNAT1P51948 309 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 SP4Q02446 784 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 BSNDQ8WZ55 320 aa16.24■□□□□ 0.19
CSDC2-201ENST00000306149 DENND3A2RUS2 1198 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 P4HA2O15460 535 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 ASNSP08243 561 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 CTNNA2P26232 953 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 NPTX2P47972 431 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 CDR1P51861 262 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 SNX1Q13596 522 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 PCNX4Q63HM2 1172 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 LLGL2Q6P1M3 1020 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 SUPT20HQ8NEM7 779 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 HELQQ8TDG4 1101 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 PARD3BQ8TEW8 1205 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 C1orf54Q8WWF1 131 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 CD101Q93033 1021 aa16.23■□□□□ 0.19
CSDC2-201ENST00000306149 CENPTQ96BT3 561 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms