RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 KIF2CQ99661 725 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 SPON2Q9BUD6 331 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 KRT84Q9NSB2 600 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 GOLGA8MH3BSY2 632 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 SH2B2O14492 632 aaPredicted RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 YWHAZP63104 245 aaKnown RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 GUCY1A3Q02108 690 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 DPCR1Q3MIW9 517 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 ESRP1Q6NXG1 681 aaKnown RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 HS6ST3Q8IZP7 471 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 IARS2Q9NSE4 1012 aaKnown RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 ASNSD1Q9NWL6 643 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 HEY1Q9Y5J3 304 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 NME3Q13232 169 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 NNTQ13423 1086 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 ZNF772Q68DY9 489 aaPredicted RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 ZNF438Q7Z4V0 828 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 OOSP2Q86WS3 158 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 THOC1Q96FV9 657 aaKnown RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 COA1Q9GZY4 146 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 GINM1Q9NU53 330 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 CCDC195A0A1B0GUA6 201 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 MYO1GB0I1T2 1018 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 KIF28PB7ZC32 967 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 MEFVO15553 781 aaPredicted RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 AKT1P31749 480 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 UBXN2AP68543 259 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 HDLBPQ00341 1268 aaKnown RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 CCDC149Q6ZUS6 474 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 INPP5DQ92835 1189 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 TTC17Q96AE7 1141 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 EEF2KMTQ96G04 330 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 GCOM2Q9BZD3 368 aaPredicted RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 OSBPL6Q9BZF3 934 aa12.75□□□□□ -0.37
PCF11-201ENST00000298281 MAP3K20Q9NYL2 800 aaKnown RBP12.75□□□□□ -0.37
PCF11-201ENST00000298281 CLASP1Q7Z460 1538 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 KCNA2P16389 499 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 ADORA1P30542 326 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 ARF5P84085 180 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 TTC23Q5W5X9 447 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 RMDN1Q96DB5 314 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
PCF11-201ENST00000298281 KLF15Q9UIH9 416 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 APOBEC2Q9Y235 224 aaKnown RBP12.74□□□□□ -0.37
PCF11-201ENST00000298281 ZMYND10O75800 440 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 KCNJ6P48051 423 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCF11-201ENST00000298281 MPP6Q9NZW5 540 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 MYO3BQ8WXR4 1341 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 COPEO14579 308 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 HMOX2P30519 316 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 FLT3P36888 993 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 LRRC41Q15345 812 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 CATSPER4Q7RTX7 472 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 VSTM4Q8IW00 320 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 NGRNQ9NPE2 291 aaKnown RBP12.74□□□□□ -0.37
PCF11-201ENST00000298281 GYG2O15488 501 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 TBXAS1P24557 533 aaPredicted RBP12.74□□□□□ -0.37
PCF11-201ENST00000298281 RASSF3Q86WH2 238 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 APLFQ8IW19 511 aaPredicted RBP12.74□□□□□ -0.37
PCF11-201ENST00000298281 CYBBP04839 570 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 PHKA2P46019 1235 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 TMPRSS15P98073 1019 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 MAPK6Q16659 721 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 SYT2Q8N9I0 419 aaPredicted RBP12.74□□□□□ -0.37
PCF11-201ENST00000298281 SAAL1Q96ER3 474 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 AURKCQ9UQB9 309 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 RHOBTB1O94844 696 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 DYNC1I2Q13409 638 aaKnown RBP12.74□□□□□ -0.37
PCF11-201ENST00000298281 KLHL38Q2WGJ6 581 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 MIIPQ5JXC2 388 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
PCF11-201ENST00000298281 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 DFFAO00273 331 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 CLDN3O15551 220 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 CCDC130P13994 396 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 CACNB2Q08289 660 aaPredicted RBP12.73□□□□□ -0.37
PCF11-201ENST00000298281 COA7Q96BR5 231 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TSC22D3Q99576 134 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 SLC25A13Q9UJS0 675 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 RPN2P04844 631 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 OR6P1Q8NGX9 317 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TBC1D22BQ9NU19 505 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 HPGDP15428 266 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TLK2Q86UE8 772 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 NSMCE4AQ9NXX6 385 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 ADAM22Q9P0K1 906 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 STAP1Q9ULZ2 295 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
PCF11-201ENST00000298281 DYRK3O43781 588 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TBC1D4O60343 1298 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 PDHA1P08559 390 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 TBC1D9BQ66K14 1250 aa12.73□□□□□ -0.37
PCF11-201ENST00000298281 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms