RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 AP5Z1O43299 807 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 NMT1P30419 496 aaKnown RBP17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 ARSEP51690 589 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 ORC2Q13416 577 aaPredicted RBP17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 ANKMY2Q8IV38 441 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 MMGT1Q8N4V1 131 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 AGPAT1Q99943 283 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 COA1Q9GZY4 146 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 ADA2Q9NZK5 511 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 SUN2Q9UH99 717 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 MYO5CQ9NQX4 1742 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 CYP26A1O43174 497 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 GALCP54803 685 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 PSMC1P62191 440 aaKnown RBP17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 FRMD5Q7Z6J6 570 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 DDX42Q86XP3 938 aaKnown RBP eCLIP17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 CCSER1Q9C0I3 900 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 TAC1P20366 129 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 SCTRP47872 440 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 MORF4L2Q15014 288 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 ARL13BQ3SXY8 428 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 CPDO75976 1380 aa17.45■□□□□ 0.38
SH3RF1-201ENST00000284637 IGF2BP3O00425 579 aaKnown RBP eCLIP17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 RABGAP1LQ5R372 815 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 AGR3Q8TD06 166 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 TRABDQ9H4I3 376 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 KIAA1586Q9HCI6 787 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 SLC12A6Q9UHW9 1150 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 PFASO15067 1338 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 OLFML2BQ68BL8 750 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 SLC35G2Q8TBE7 412 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 ARL8AQ96BM9 186 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 DCPSQ96C86 337 aaKnown RBP17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 RHBDL2Q9NX52 303 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 IP6K2Q9UHH9 426 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 KLK7P49862 253 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 ARPP19P56211 112 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 PPP1R18Q6NYC8 613 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 EIF2AK1Q9BQI3 630 aaKnown RBP17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 LXNQ9BS40 222 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 STRIP2Q9ULQ0 834 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 KIF1BO60333 1816 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 RAD51CO43502 376 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 SKAP2O75563 359 aaPredicted RBP17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 KDSRQ06136 332 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 SEMA3FQ13275 785 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 DHX38Q92620 1227 aaKnown RBP17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 C9orf72Q96LT7 481 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 ING2Q9H160 280 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
SH3RF1-201ENST00000284637 SSU72P8A0A1W2PR75 194 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 PGM1P36871 562 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 FAM210AQ96ND0 272 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 ISCA1Q9BUE6 129 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 FAM96AQ9H5X1 160 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 PALMDQ9NP74 551 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 KLHL11Q9NVR0 708 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 SEL1LQ9UBV2 794 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 CTDNEP1O95476 244 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 GGPS1O95749 300 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 ACADSP16219 412 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 POU5F1BQ06416 359 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 CLEC4GQ6UXB4 293 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 SENP2Q9HC62 589 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 CYP26B1Q9NR63 512 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 TSC22D4Q9Y3Q8 395 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 SASH3O75995 380 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 BCAR1P56945 870 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 RHPN2Q8IUC4 686 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 RNF139Q8WU17 664 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 TRIM15Q9C019 465 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 FAM49AQ9H0Q0 323 aaPredicted RBP17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 RGL1Q9NZL6 768 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 ORC4O43929 436 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 RHOBTB3O94955 611 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 STAT4Q14765 748 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 MAPK6Q16659 721 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 GIPC2Q8TF65 315 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 RAVER2Q9HCJ3 691 aaKnown RBP17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 ZNF446Q9NWS9 450 aa17.43■□□□□ 0.38
SH3RF1-201ENST00000284637 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 P4HBP07237 508 aaKnown RBP17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 KRT7P08729 469 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 SDC4P31431 198 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 ANTXR2P58335 489 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 MDH1BQ5I0G3 518 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 SYCP2LQ5T4T6 812 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 LMBRD2Q68DH5 695 aaPredicted RBP17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 KIF2BQ8N4N8 673 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 B4GALNT2Q8NHY0 566 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 NCLNQ969V3 563 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 ANKRD27Q96NW4 1050 aa17.42■□□□□ 0.38
SH3RF1-201ENST00000284637 L3MBTL1Q9Y468 752 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms