RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 N4BP3O15049 544 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 FGFR1OPO95684 399 aaKnown RBP12.13□□□□□ -0.47
CTSC-201ENST00000227266 CDK11BP21127 795 aaKnown RBP12.13□□□□□ -0.47
CTSC-201ENST00000227266 GARTP22102 1010 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 CASP4P49662 377 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■□□ 15.9
CTSC-201ENST00000227266 NOTUMQ6P988 496 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 C12orf56Q8IXR9 622 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 USP38Q8NB14 1042 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 CEP63Q96MT8 703 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 THAP9Q9H5L6 903 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 PTPRHQ9HD43 1115 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 DMAC2Q9NW81 257 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 FRMD4BQ9Y2L6 1034 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 STYXL1Q9Y6J8 313 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 TRIM43BA6NCK2 446 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 ABLIM1O14639 778 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 NBNO60934 754 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 AKAP3O75969 853 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 PROZP22891 400 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 AXLP30530 894 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 MCL1Q07820 350 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 NFIL3Q16649 462 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 CCDC40Q4G0X9 1142 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 SEZ6Q53EL9 994 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 TWF2Q6IBS0 349 aaKnown RBP12.13□□□□□ -0.47
CTSC-201ENST00000227266 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 SLC9A9Q8IVB4 645 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 TRIM43Q96BQ3 446 aaPredicted RBP12.13□□□□□ -0.47
CTSC-201ENST00000227266 ADPGKQ9BRR6 497 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 IFIH1Q9BYX4 1025 aaKnown RBP12.13□□□□□ -0.47
CTSC-201ENST00000227266 CDT1Q9H211 546 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 ERVK-5Q9HDB9 667 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
CTSC-201ENST00000227266 SQORQ9Y6N5 450 aa12.13□□□□□ -0.47
CTSC-201ENST00000227266 AP5Z1O43299 807 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 NPTXRO95502 500 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 EPB41P11171 864 aaKnown RBP12.12□□□□□ -0.47
CTSC-201ENST00000227266 ACOT2P49753 483 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 OSTNP61366 133 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 MYBPC2Q14324 1141 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 ZBTB41Q5SVQ8 909 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 CDKAL1Q5VV42 579 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 SLC27A1Q6PCB7 646 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 FILIP1Q7Z7B0 1213 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 CBWD2Q8IUF1 395 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 ZC3H3Q8IXZ2 948 aaKnown RBP12.12□□□□□ -0.47
CTSC-201ENST00000227266 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
CTSC-201ENST00000227266 CNOT6LQ96LI5 555 aaKnown RBP12.12□□□□□ -0.47
CTSC-201ENST00000227266 EIF2AQ9BY44 585 aaKnown RBP12.12□□□□□ -0.47
CTSC-201ENST00000227266 TRIM6Q9C030 488 aaPredicted RBP12.12□□□□□ -0.47
CTSC-201ENST00000227266 KCNJ18B7U540 433 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 EXTL3O43909 919 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 ADCY5O95622 1261 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 MCF2P10911 925 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 RAG1P15918 1043 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 ZNF18P17022 549 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 ITGB8P26012 769 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 PSMC2P35998 433 aaKnown RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 GPNMBQ14956 572 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 SNRNP35Q16560 246 aaKnown RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 APBB1IPQ7Z5R6 666 aaPredicted RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 DEFB128Q7Z7B8 93 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 FAM186BQ8IYM0 893 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 C7orf61Q8IZ16 206 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 GPD1LQ8N335 351 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 CEP120Q8N960 986 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 PRKAG2Q9UGJ0 569 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 KIAA0391O15091 583 aaKnown RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 OGTO15294 1046 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 SLC16A3O15427 465 aaKnown RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 GNA14O95837 355 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 TIMP1P01033 207 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 TNFSF9P41273 254 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 MTIF2P46199 727 aaKnown RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 DCAF4L1Q3SXM0 396 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 TCP11X2Q5H9J9 407 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 TMEM174Q8WUU8 243 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 CHST12Q9NRB3 414 aa12.11□□□□□ -0.47
CTSC-201ENST00000227266 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
CTSC-201ENST00000227266 ZNF233A6NK53 670 aa12.1□□□□□ -0.47
CTSC-201ENST00000227266 MGEA5O60502 916 aa12.1□□□□□ -0.47
CTSC-201ENST00000227266 LDHAP00338 332 aaKnown RBP12.1□□□□□ -0.47
CTSC-201ENST00000227266 ADRB2P07550 413 aa12.1□□□□□ -0.47
CTSC-201ENST00000227266 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
CTSC-201ENST00000227266 UBXN11Q5T124 520 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms