RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 DACH2Q96NX9 599 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 PARD6BQ9BYG5 372 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 OSBPL3Q9H4L5 887 aa14.03□□□□□ -0.16
COL1A1-201ENST00000225964 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-201ENST00000225964 YWHABP31946 246 aaKnown RBP14.02□□□□□ -0.16
COL1A1-201ENST00000225964 TMEM62Q0P6H9 643 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 DRAP1Q14919 205 aaPredicted RBP14.02□□□□□ -0.16
COL1A1-201ENST00000225964 QRICH1Q2TAL8 776 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 B4GALNT2Q8NHY0 566 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 PGBD4Q96DM1 585 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 PPP1R36Q96LQ0 422 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 PLEKHG2Q9H7P9 1386 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 ASAP2O43150 1006 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 TRAPPC3O43617 180 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 MMEP08473 750 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 DDX5P17844 614 aaKnown RBP14.02□□□□□ -0.16
COL1A1-201ENST00000225964 AKT1P31749 480 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 KRT72Q14CN4 511 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 LMBRD2Q68DH5 695 aaPredicted RBP14.02□□□□□ -0.16
COL1A1-201ENST00000225964 KCNV1Q6PIU1 500 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 OXER1Q8TDS5 423 aa14.02□□□□□ -0.16
COL1A1-201ENST00000225964 EML4Q9HC35 981 aaKnown RBP14.02□□□□□ -0.16
COL1A1-201ENST00000225964 JPH1Q9HDC5 661 aaPredicted RBP14.02□□□□□ -0.16
COL1A1-201ENST00000225964 ZNF197O14709 1029 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 ZNF500O60304 480 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-201ENST00000225964 FTLP02792 175 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-201ENST00000225964 ZFXP17010 805 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-201ENST00000225964 PDIA2Q13087 525 aaKnown RBP14.02□□□□□ -0.17
COL1A1-201ENST00000225964 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.17
COL1A1-201ENST00000225964 BRINP3Q76B58 766 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 AGR3Q8TD06 166 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 TMEM60Q9H2L4 133 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 PCDHGB4Q9UN71 923 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 SNX5Q9Y5X3 404 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 PPP3CCP48454 512 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 BCAR1P56945 870 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 DUOXA2Q1HG44 320 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 TNIP3Q96KP6 325 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 PARVAQ9NVD7 372 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 WARS2Q9UGM6 360 aaKnown RBP14.02□□□□□ -0.17
COL1A1-201ENST00000225964 A0A087WUV0 522 aaPredicted RBP14.02□□□□□ -0.17
COL1A1-201ENST00000225964 CDH6P55285 790 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 DAB2P98082 770 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 MEI1Q5TIA1 1274 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 GJB4Q9NTQ9 266 aa14.02□□□□□ -0.17
COL1A1-201ENST00000225964 KRT14P02533 472 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 SKIP12755 728 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 ENAHQ8N8S7 591 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 MXD3Q9BW11 206 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 HACL1Q9UJ83 578 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 PCDHB7Q9Y5E2 793 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 NPHP3-ACAD11A0A0J9YXS1 232 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 MIF4GDA9UHW6 222 aaKnown RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 CAV1Q03135 178 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 SDE2Q6IQ49 451 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 TTC39CQ8N584 583 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 UBE2Q2Q8WVN8 375 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 OTUB1Q96FW1 271 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 SH3BP1Q9Y3L3 701 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 A0A0G2JLW4 131 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 FAM47EQ6ZV65 393 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 PID1Q7Z2X4 250 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 ZC3H18Q86VM9 953 aaKnown RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 MRPL40Q9NQ50 206 aaKnown RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 TLR2O60603 784 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 C6orf222P0C671 652 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 SLC9A5Q14940 896 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 ST13P4Q8IZP2 240 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 ASAP3Q8TDY4 903 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 OVOS2A0A0G2JMS6 1433 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 OVOS2A0A0J9YW53 1432 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 OVOS2Q6IE36 1432 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 EMSYQ7Z589 1322 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 CCDC188H7C350 402 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 CHRNA3P32297 505 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 PMS2P54278 862 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 POLE2P56282 527 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 IL31Q6EBC2 164 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 TBC1D1Q86TI0 1168 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 ZBED8Q8IZ13 594 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 BTBD6Q96KE9 485 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 DCP1AQ9NPI6 582 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 CCDC85BQ15834 202 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 SPDYAQ5MJ70 313 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 C1orf146Q5VVC0 180 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 USP33Q8TEY7 942 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 GPBP1L1Q9HC44 474 aaPredicted RBP14.01□□□□□ -0.17
COL1A1-201ENST00000225964 ABHD10Q9NUJ1 306 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 MAD2L2Q9UI95 211 aa14.01□□□□□ -0.17
COL1A1-201ENST00000225964 ADGRL3Q9HAR2 1447 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 DYNC1LI2O43237 492 aaPredicted RBP14□□□□□ -0.17
COL1A1-201ENST00000225964 STAT5BP51692 787 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 ZBTB17Q13105 803 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 PDAP1Q13442 181 aaKnown RBP14□□□□□ -0.17
COL1A1-201ENST00000225964 TXNRD1Q16881 649 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 LRRC8EQ6NSJ5 796 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 LDHDQ86WU2 507 aa14□□□□□ -0.17
COL1A1-201ENST00000225964 FOPNLQ96NB1 174 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms