RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 GAD1Q99259 594 aa21.14■□□□□ 0.97
SMN2-215ENST00000628696 APOL6Q9BWW8 343 aa21.14■□□□□ 0.97
SMN2-215ENST00000628696 EIF2AQ9BY44 585 aaKnown RBP21.14■□□□□ 0.97
SMN2-215ENST00000628696 RNF39Q9H2S5 420 aa21.14■□□□□ 0.97
SMN2-215ENST00000628696 UBN1Q9NPG3 1134 aa21.14■□□□□ 0.97
SMN2-215ENST00000628696 TPCN1Q9ULQ1 816 aa21.14■□□□□ 0.97
SMN2-215ENST00000628696 IPPQ9Y573 584 aa21.14■□□□□ 0.97
SMN2-215ENST00000628696 FAM205CA6NFA0 338 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 INO80B-WBP1J3KQ70 363 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 PFKFB2O60825 505 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 LILRB3O75022 631 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 SOD2P04179 222 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 MYBP10242 640 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 NCBP1Q09161 790 aaKnown RBP21.13■□□□□ 0.97
SMN2-215ENST00000628696 ASTLQ6HA08 431 aaPredicted RBP21.13■□□□□ 0.97
SMN2-215ENST00000628696 TAS1R1Q7RTX1 841 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 SLFN12Q8IYM2 578 aa21.13■□□□□ 0.97
SMN2-215ENST00000628696 ORC3Q9UBD5 711 aaPredicted RBP21.13■□□□□ 0.97
SMN2-215ENST00000628696 TSPAN1O60635 241 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 SLITRK3O94933 977 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 PTENP60484 403 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 NR5A1Q13285 461 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 TFDP1Q14186 410 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 MXD4Q14582 209 aaPredicted RBP21.12■□□□□ 0.97
SMN2-215ENST00000628696 NOTUMQ6P988 496 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 COLGALT2Q8IYK4 626 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 FLCNQ8NFG4 579 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 HERC2P3Q9BVR0 1158 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 XPNPEP1Q9NQW7 623 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 MAN1C1Q9NR34 630 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 MARCH5Q9NX47 278 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 SSX2IPQ9Y2D8 614 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 HES2Q9Y543 173 aa21.12■□□□□ 0.97
SMN2-215ENST00000628696 PLXNA3P51805 1871 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 ZFHX2Q9C0A1 2572 aaPredicted RBP21.11■□□□□ 0.97
SMN2-215ENST00000628696 ARL5CA6NH57 179 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 ADH1AP07327 375 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 AXLP30530 894 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 KRT2P35908 639 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 MLH1P40692 756 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 SPIRE1Q08AE8 756 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 WASF1Q92558 559 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 CCDC43Q96MW1 224 aaKnown RBP21.11■□□□□ 0.97
SMN2-215ENST00000628696 RPS6KC1Q96S38 1066 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 EIF2AK1Q9BQI3 630 aaKnown RBP21.11■□□□□ 0.97
SMN2-215ENST00000628696 TRIM6Q9C030 488 aaPredicted RBP21.11■□□□□ 0.97
SMN2-215ENST00000628696 CSRNP2Q9H175 543 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 BRMS1Q9HCU9 246 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 MIOSQ9NXC5 875 aa21.11■□□□□ 0.97
SMN2-215ENST00000628696 NR1I2O75469 434 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 CTDNEP1O95476 244 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 SCNN1GP51170 649 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 TDGQ13569 410 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 PCBP1Q15365 356 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMN2-215ENST00000628696 ASAP3Q8TDY4 903 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 CCDC51Q96ER9 411 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 ZFP42Q96MM3 310 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 PCDHA12Q9UN75 941 aa21.1■□□□□ 0.97
SMN2-215ENST00000628696 CCDC195A0A1B0GUA6 201 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 TEX28O15482 410 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 GLUD2P49448 558 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 CLCN5P51795 746 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 CALCRLQ16602 461 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 ELMSAN1Q6PJG2 1045 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 C15orf39Q6ZRI6 1047 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 HACE1Q8IYU2 909 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 COLEC11Q9BWP8 271 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 KCNK12Q9HB15 430 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 FBXL21Q9UKT6 434 aa21.09■□□□□ 0.97
SMN2-215ENST00000628696 PTPRZ1P23471 2315 aaPredicted RBP21.09■□□□□ 0.97
SMN2-215ENST00000628696 USP34Q70CQ2 3546 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 A0A087WWV3 80 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 F8W810 466 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 GLUD1P00367 558 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 SPATA31D3P0C874 917 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 GBP2P32456 591 aaPredicted RBP21.08■□□□□ 0.97
SMN2-215ENST00000628696 FOSBP53539 338 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 MBTD1Q05BQ5 628 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 CAPSQ13938 189 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 KIAA0319Q5VV43 1072 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 SPATA31D4Q6ZUB0 917 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 CDR2LQ86X02 465 aaPredicted RBP21.08■□□□□ 0.97
SMN2-215ENST00000628696 NECAB1Q8N987 351 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 NXF3Q9H4D5 531 aaKnown RBP21.08■□□□□ 0.97
SMN2-215ENST00000628696 ANKEF1Q9NU02 776 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 DPP7Q9UHL4 492 aa21.08■□□□□ 0.97
SMN2-215ENST00000628696 MTCL1Q9Y4B5 1905 aaKnown RBP21.08■□□□□ 0.96
SMN2-215ENST00000628696 INPPL1O15357 1258 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 DGAT1O75907 488 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 ARF4P18085 180 aaPredicted RBP21.07■□□□□ 0.96
SMN2-215ENST00000628696 AKAP5P24588 427 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 TXKP42681 527 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 DSC1Q08554 894 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 ANKRD1Q15327 319 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 PALB2Q86YC2 1186 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 IFNLR1Q8IU57 520 aaPredicted RBP21.07■□□□□ 0.96
SMN2-215ENST00000628696 GLYCTKQ8IVS8 523 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 CMASQ8NFW8 434 aaPredicted RBP21.07■□□□□ 0.96
SMN2-215ENST00000628696 PIGOQ8TEQ8 1089 aa21.07■□□□□ 0.96
SMN2-215ENST00000628696 B3GALT6Q96L58 329 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms