RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 PCNX4Q63HM2 1172 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 TMCO3Q6UWJ1 677 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 GRAMD1CQ8IYS0 662 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 CCDC51Q96ER9 411 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 MAML3Q96JK9 1138 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 FGD4Q96M96 766 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 TUBB2BQ9BVA1 445 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 ASPSCR1Q9BZE9 553 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 RMND1Q9NWS8 449 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 SRRDQ9UH36 339 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 ASTN1O14525 1302 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 CYP3A4P08684 503 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 CTSHP09668 335 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 RAC2P15153 192 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 HPDP32754 393 aaPredicted RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 TXLNAP40222 546 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 AFMP43652 599 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 FLT3LGP49771 235 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 ADKP55263 362 aaKnown RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 PRMT2P55345 433 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 ATP2C1P98194 919 aaPredicted RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 SPAG1Q07617 926 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 RAB33AQ14088 237 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 STXBP2Q15833 593 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 MZT2AQ6P582 158 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 RTL10Q7L3V2 364 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 NKAIN3Q8N8D7 197 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 IL31RAQ8NI17 732 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 NPLOC4Q8TAT6 608 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 CRYGNQ8WXF5 182 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 AGAP3Q96P47 875 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 SMYD2Q9NRG4 433 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 SAMSN1Q9NSI8 373 aaKnown RBP12.6□□□□□ -0.39
LINC00538-201ENST00000626109 FAM53CQ9NYF3 392 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 GABRQQ9UN88 632 aa12.6□□□□□ -0.39
LINC00538-201ENST00000626109 LCTP09848 1927 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 STAM2O75886 525 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 HSPA8P11142 646 aaKnown RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 GCFC2P16383 781 aaKnown RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 EDNRBP24530 442 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 STIP1P31948 543 aaKnown RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 PLA2G4AP47712 749 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 CTCFP49711 727 aaPredicted RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 CAP1Q01518 475 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 ZNF174Q15697 407 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 OCLNQ16625 522 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 HSP90AA4PQ58FG1 418 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 ARL6IP4Q66PJ3 421 aaKnown RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 CCBE1Q6UXH8 406 aaPredicted RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 USP49Q70CQ1 688 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 EEPD1Q7L9B9 569 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 VSIG10LQ86VR7 867 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 CNGA4Q8IV77 575 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 TRMT44Q8IYL2 757 aaKnown RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
LINC00538-201ENST00000626109 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
LINC00538-201ENST00000626109 CCNT1O60563 726 aaKnown RBP12.58□□□□□ -0.39
LINC00538-201ENST00000626109 MZF1P28698 734 aaPredicted RBP12.58□□□□□ -0.39
LINC00538-201ENST00000626109 TSPY1Q01534 308 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 CUL4BQ13620 913 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 TRIM14Q14142 442 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 PKN2Q16513 984 aaKnown RBP12.58□□□□□ -0.39
LINC00538-201ENST00000626109 OLFML2BQ68BL8 750 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 MOXD1Q6UVY6 613 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 ARMCX2Q7L311 632 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 IGSF22Q8N9C0 903 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 LRRN4Q8WUT4 740 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 GPRASP2Q96D09 838 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 GTF3C4Q9UKN8 822 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 TRIM17Q9Y577 477 aa12.58□□□□□ -0.39
LINC00538-201ENST00000626109 ITIH6Q6UXX5 1313 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 SYNGAP1Q96PV0 1343 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 PLXNA1Q9UIW2 1896 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 FAM170AA1A519 330 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 TRIM64A6NGJ6 449 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 TRIM64BA6NI03 449 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 VSTM5A8MXK1 200 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 KLF4O43474 513 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 CIITAP33076 1130 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 LONP1P36776 959 aaKnown RBP12.58□□□□□ -0.4
LINC00538-201ENST00000626109 HTR3AP46098 478 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 NEK2P51955 445 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 GOLGA8FQ08AF8 430 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 GOLGA8DPQ0D2H9 430 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 ORC2Q13416 577 aaPredicted RBP12.58□□□□□ -0.4
LINC00538-201ENST00000626109 CEP55Q53EZ4 464 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 ZNF771Q7L3S4 317 aaPredicted RBP12.58□□□□□ -0.4
LINC00538-201ENST00000626109 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
LINC00538-201ENST00000626109 RAET1EQ8TD07 263 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 NEK9Q8TD19 979 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 PLCB1Q9NQ66 1216 aa12.58□□□□□ -0.4
LINC00538-201ENST00000626109 ZNFX1Q9P2E3 1918 aaKnown RBP12.58□□□□□ -0.4
LINC00538-201ENST00000626109 ALG1L2C9J202 215 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 TADA3O75528 432 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 TDP2O95551 362 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 MCM7P33993 719 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 263.3 ms