RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SLC25A27O95847 323 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 COPB2P35606 906 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 POLGP54098 1239 aaPredicted RBP17.02■□□□□ 0.31
NR1H3-235ENST00000616973 GPS2Q13227 327 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 NEDD9Q14511 834 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 POMGNT1Q8WZA1 660 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 MS4A14Q96JA4 679 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 CEP89Q96ST8 783 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 LRRC1Q9BTT6 524 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 EHD2Q9NZN4 543 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.31
NR1H3-235ENST00000616973 STYXL1Q9Y6J8 313 aa17.02■□□□□ 0.31
NR1H3-235ENST00000616973 GSTTP1A0A1W2PQM5 241 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 ANKRD62A6NC57 917 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 HNRNPDLO14979 420 aaKnown RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 CNMDO75829 334 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 ZBTB48P10074 688 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 UBA1P22314 1058 aaKnown RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 TNFRSF8P28908 595 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 TCEAL1Q15170 157 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 NCAPG2Q86XI2 1143 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 FAM71AQ8IYT1 594 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 AFAP1L1Q8TED9 768 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 CTNNBL1Q8WYA6 563 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 PORCNQ9H237 461 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 SUGCTQ9HAC7 445 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 ST7Q9NRC1 585 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 RBM12Q9NTZ6 932 aaKnown RBP17.01■□□□□ 0.31
NR1H3-235ENST00000616973 AGTPBP1Q9UPW5 1226 aa17.01■□□□□ 0.31
NR1H3-235ENST00000616973 LRRN2O75325 713 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 PIGRP01833 764 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 NF2P35240 595 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 ARL2P36404 184 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 RFC5P40937 340 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 MFAP3P55082 362 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 HADHBP55084 474 aaKnown RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 PPIL2Q13356 520 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 USP50Q70EL3 339 aaPredicted RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 DNAAF5Q86Y56 855 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 ZC3H15Q8WU90 426 aaKnown RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 SHC3Q92529 594 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 OTUD5Q96G74 571 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 ACBD3Q9H3P7 528 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 SMARCAL1Q9NZC9 954 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 PACSIN2Q9UNF0 486 aaPredicted RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 PPME1Q9Y570 386 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 SORBS3O60504 671 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 PEX10O60683 326 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 OAS2P29728 719 aaKnown RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 NAMPTP43490 491 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 TERF2Q15554 542 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 TARBP2Q15633 366 aaKnown RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 FAM160B1Q5W0V3 765 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 ACTRT1Q8TDG2 376 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 SEMA4DQ92854 862 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 CCDC127Q96BQ5 260 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 CDCA5Q96FF9 252 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 KREMEN1Q96MU8 473 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 MPHOSPH6Q99547 160 aaKnown RBP17■□□□□ 0.31
NR1H3-235ENST00000616973 SELENOOQ9BVL4 669 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 ISCUQ9H1K1 167 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 NRBP2Q9NSY0 501 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 TMEM59LQ9UK28 342 aa17■□□□□ 0.31
NR1H3-235ENST00000616973 EXTL3O43909 919 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 ZC3H11AO75152 810 aaKnown RBP eCLIP16.99■□□□□ 0.31
NR1H3-235ENST00000616973 CLDN10P78369 228 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 C8orf74Q6P047 294 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 PEX26Q7Z412 305 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 NT5DC3Q86UY8 548 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 USP38Q8NB14 1042 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 HELQQ8TDG4 1101 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 BICD1Q96G01 975 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 L3MBTL3Q96JM7 780 aaPredicted RBP16.99■□□□□ 0.31
NR1H3-235ENST00000616973 CLMNQ96JQ2 1002 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 FAM81BQ96LP2 452 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 NT5C1BQ96P26 610 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 PCYT2Q99447 389 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 PRDM10Q9NQV6 1147 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 STIM2Q9P246 746 aa16.99■□□□□ 0.31
NR1H3-235ENST00000616973 DMGDHQ9UI17 866 aaKnown RBP16.99■□□□□ 0.31
NR1H3-235ENST00000616973 ZNF233A6NK53 670 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 KCNK3O14649 394 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 GLRA2P23416 452 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 MATR3P43243 847 aaKnown RBP eCLIP16.98■□□□□ 0.31
NR1H3-235ENST00000616973 LIG4P49917 911 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 STRN3Q13033 797 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 METTL7BQ6UX53 244 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 ASAP3Q8TDY4 903 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 AENQ8WTP8 325 aaKnown RBP16.98■□□□□ 0.31
NR1H3-235ENST00000616973 SLC20A1Q8WUM9 679 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 SLC7A3Q8WY07 619 aa16.98■□□□□ 0.31
NR1H3-235ENST00000616973 HES6Q96HZ4 224 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms