RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CYP2D7A0A087X1C5 515 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ADCY1Q08828 1119 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ANGPTL8Q6UXH0 198 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 CYB5R4Q7L1T6 521 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 TTLL6Q8N841 843 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 PPHLN1Q8NEY8 458 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 TSPAN17Q96FV3 270 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 KDM4CQ9H3R0 1056 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 NGRNQ9NPE2 291 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 E5RI56 91 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 SMAPO00193 183 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 MARK3P27448 753 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 AARSP49588 968 aaKnown RBP eCLIP4.84□□□□□ -1.632e-6■■■■■ 61.6
CHD9-221ENST00000615216 ABCE1P61221 599 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 DRAP1Q14919 205 aaPredicted RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 HIF1AQ16665 826 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 KRT27Q7Z3Y8 459 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 TNIP2Q8NFZ5 429 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 OTUB1Q96FW1 271 aaPredicted RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 PLA2G12BQ9BX93 195 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ADAM21Q9UKJ8 722 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 PCDHB8Q9UN66 801 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 GOLGA8IPA6NC78 632 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ARHGEF9O43307 516 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 HNRNPRO43390 633 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 GH2P01242 217 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 NSUN2Q08J23 767 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD9-221ENST00000615216 FLOT2Q14254 428 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ELOA2Q8IYF1 753 aaPredicted RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 RAB42Q8N4Z0 105 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 TMCO5AQ8N6Q1 288 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 KRT35Q92764 455 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ALKBH8Q96BT7 664 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 LXNQ9BS40 222 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 EPN3Q9H201 632 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 HERC5Q9UII4 1024 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 POTEMA6NI47 508 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 P4HBP07237 508 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 PSMC1P62191 440 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 INPP5AQ14642 412 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 STILQ15468 1287 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 P3H1Q32P28 736 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 NFRKBQ6P4R8 1299 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 RGS9BPQ6ZS82 235 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 TEX9Q8N6V9 391 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 PIGOQ8TEQ8 1089 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 NEUROG2Q9H2A3 272 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 COG4Q9H9E3 785 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 DENND3A2RUS2 1198 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 PHF2O75151 1096 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 AGTP01019 485 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 KRT14P02533 472 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 KRT4P19013 534 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 OSTNP61366 133 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 MED21Q13503 144 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 PPP6R3Q5H9R7 873 aaPredicted RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 CCDC137Q6PK04 289 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 NOP9Q86U38 636 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 HINFPQ9BQA5 517 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 NARFQ9UHQ1 456 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 MORC2Q9Y6X9 1032 aaPredicted RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 ZNF335Q9H4Z2 1342 aaPredicted RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 E9PMD0 336 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 KIF1CO43896 1103 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 IL10P22301 178 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 POLE2P56282 527 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 CAPRIN1Q14444 709 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 KSR1Q8IVT5 923 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ADGRF4Q8IZF3 695 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 LZICQ8WZA0 190 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 EXT2Q93063 718 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 PBXIP1Q96AQ6 731 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 BTBD6Q96KE9 485 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 ZMAT2Q96NC0 199 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 SMYD3Q9H7B4 428 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 QTRT2Q9H974 415 aaKnown RBP4.84□□□□□ -1.63
CHD9-221ENST00000615216 SLC9A2Q9UBY0 812 aa4.84□□□□□ -1.63
CHD9-221ENST00000615216 CCDC195A0A1B0GUA6 201 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 PDXKO00764 312 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 ECE2O60344 883 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 DIAPH2O60879 1101 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 SPAG6O75602 509 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 STAT3P40763 770 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 AP1B1Q10567 949 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 SUSD4Q5VX71 490 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 C1orf228Q6PIY5 440 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 NUDCD3Q8IVD9 361 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 ABTB1Q969K4 478 aaPredicted RBP4.84□□□□□ -1.64
CHD9-221ENST00000615216 MMP19Q99542 508 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 EIF2AK1Q9BQI3 630 aaKnown RBP4.84□□□□□ -1.64
CHD9-221ENST00000615216 WWP1Q9H0M0 922 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 CHCHD3Q9NX63 227 aaKnown RBP4.84□□□□□ -1.64
CHD9-221ENST00000615216 VGLL3A8MV65 326 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 GCLMP48507 274 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 ARFIP2P53365 341 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 KCNQ4P56696 695 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 PDCLQ13371 301 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 Q3C1V9 767 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 LRRC8BQ6P9F7 803 aa4.84□□□□□ -1.64
CHD9-221ENST00000615216 TBC1D1Q86TI0 1168 aaPredicted RBP4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms