RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 EPHA7Q15375 998 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 CCDC92Q53HC0 331 aaPredicted RBP18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 MTHFD1LQ6UB35 978 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 NUDCD3Q8IVD9 361 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 ELMOD1Q8N336 334 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 ARMC2Q8NEN0 867 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 LIMA1Q9UHB6 759 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 SLC4A7Q9Y6M7 1214 aa18.46■□□□□ 0.55
HMGXB3-206ENST00000613459 SMAPO00193 183 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 AGTP01019 485 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 ATP6V1E1P36543 226 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 BCAR1P56945 870 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 RASSF3Q86WH2 238 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 TMCO5AQ8N6Q1 288 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 CDC26Q8NHZ8 85 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 URGCPQ8TCY9 931 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 M0QYV0 167 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 FTLP02792 175 aaPredicted RBP18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 HSPA9P38646 679 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 FAM213AQ9BRX8 229 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 ETNK1Q9HBU6 452 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 DCP1AQ9NPI6 582 aaPredicted RBP18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 PPP1R2P1Q96PQ5 205 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 STX18Q9P2W9 335 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 NARFQ9UHQ1 456 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 TTLL4Q14679 1199 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 CCDC137Q6PK04 289 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 EXT2Q93063 718 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 SLC10A4Q96EP9 437 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 TRIM54Q9BYV2 358 aa18.45■□□□□ 0.54
HMGXB3-206ENST00000613459 RTN2O75298 545 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 RAD17O75943 681 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 MAP3K10Q02779 954 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 COG1Q8WTW3 980 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 MMTAG2Q9BU76 263 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 EYA4O95677 639 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 Q3C1V9 767 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 NOP9Q86U38 636 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 GSPT2Q8IYD1 628 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 PPM1NQ8N819 430 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 HEMGNQ9BXL5 484 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 KIF17Q9P2E2 1029 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 WDR35Q9P2L0 1181 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 SLC9A2Q9UBY0 812 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 SLC16A4O15374 487 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 CDC42EP1Q00587 391 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 ACTN3Q08043 901 aaPredicted RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 PDIA2Q13087 525 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 GPS1Q13098 491 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 LAMB3Q13751 1172 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 TXNRD1Q16881 649 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 CCDC144BQ3MJ40 725 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 TTC23LQ6PF05 361 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 DHX40Q8IX18 779 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 ALKBH8Q96BT7 664 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 TEX9Q8N6V9 391 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 UVRAGQ9P2Y5 699 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 TARBP1Q13395 1621 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 ZNF335Q9H4Z2 1342 aaPredicted RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 SFI1A8K8P3 1242 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 KRT16P08779 473 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 ATICP31939 592 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 BYSLQ13895 437 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 NBPF20Q3BBV1 942 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 GPBP1L1Q9HC44 474 aaPredicted RBP18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 TRAF3IP3Q9Y228 551 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 UBN2Q6ZU65 1347 aa18.44■□□□□ 0.54
HMGXB3-206ENST00000613459 RNF103-CHMP3A0A140T963 221 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 KITP10721 976 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 ABCE1P61221 599 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 KCND2Q9NZV8 630 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 ZDHHC9Q9Y397 364 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 SSU72P8A0A1W2PR75 194 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 TTC26A0AVF1 554 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 IZUMO3Q5VZ72 239 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 NFRKBQ6P4R8 1299 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 ATL2Q8NHH9 583 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 NAF1Q96HR8 494 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 CCSER1Q9C0I3 900 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 SUFUQ9UMX1 484 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 HEY1Q9Y5J3 304 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 PAWRQ96IZ0 340 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 FAM167BQ9BTA0 163 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 MINPP1Q9UNW1 487 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 ANGPTL8Q6UXH0 198 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 APOBEC3FQ8IUX4 373 aaKnown RBP18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 RCOR2Q8IZ40 523 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 NEDD1Q8NHV4 660 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 ADCY10Q96PN6 1610 aa18.43■□□□□ 0.54
HMGXB3-206ENST00000613459 POTEB3A0JP26 581 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 POTECB2RU33 542 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 ESRRBO95718 433 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 MARK3P27448 753 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 NNMTP40261 264 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 SERPINB10P48595 397 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 NSUN2Q08J23 767 aaKnown RBP eCLIP18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 POTEBQ6S5H4 581 aa18.42■□□□□ 0.54
HMGXB3-206ENST00000613459 DDX50Q9BQ39 737 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 310.6 ms