RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 BMPR1AP36894 532 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 SMTNP53814 917 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 NCKAP1LP55160 1127 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 ATF7IP2Q5U623 682 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 ABI1Q8IZP0 508 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 IQUBQ8NA54 791 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 FBXO22Q8NEZ5 403 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 PGBD4Q96DM1 585 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 TARS2Q9BW92 718 aaKnown RBP22.08■■□□□ 1.13
SSBP4-210ENST00000601444 APOL6Q9BWW8 343 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 CWH43Q9H720 699 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 KCNH3Q9ULD8 1083 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 INPP5FQ9Y2H2 1132 aa22.08■■□□□ 1.13
SSBP4-210ENST00000601444 FNDC1Q4ZHG4 1894 aaPredicted RBP22.07■■□□□ 1.12
SSBP4-210ENST00000601444 N4BP3O15049 544 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 ITGA4P13612 1032 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 FOSL2P15408 326 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 PFKFB1P16118 471 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 IGFBP4P22692 258 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 AKAP5P24588 427 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 NMT1P30419 496 aaKnown RBP22.07■■□□□ 1.12
SSBP4-210ENST00000601444 HAUS6Q7Z4H7 955 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 SAMD11Q96NU1 681 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 GAS2L1Q99501 681 aaPredicted RBP22.07■■□□□ 1.12
SSBP4-210ENST00000601444 ACO2Q99798 780 aaKnown RBP22.07■■□□□ 1.12
SSBP4-210ENST00000601444 TRIM6Q9C030 488 aaPredicted RBP22.07■■□□□ 1.12
SSBP4-210ENST00000601444 KBTBD4Q9NVX7 518 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 STXBP5LQ9Y2K9 1186 aa22.07■■□□□ 1.12
SSBP4-210ENST00000601444 EYSQ5T1H1 3165 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 CASP1P29466 404 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 SPOUT1Q5T280 376 aaKnown RBP22.06■■□□□ 1.12
SSBP4-210ENST00000601444 SFR1Q86XK3 245 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 CNNM3Q8NE01 707 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 MRPL4Q9BYD3 311 aaKnown RBP22.06■■□□□ 1.12
SSBP4-210ENST00000601444 TNMDQ9H2S6 317 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 CUEDC2Q9H467 287 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 RSAD1Q9HA92 442 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 SERTAD1Q9UHV2 236 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 KCNG1Q9UIX4 513 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 CIZ1Q9ULV3 898 aaPredicted RBP22.06■■□□□ 1.12
SSBP4-210ENST00000601444 HPSEQ9Y251 543 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 TCHHQ07283 1943 aa22.06■■□□□ 1.12
SSBP4-210ENST00000601444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.05■■□□□ 1.12
SSBP4-210ENST00000601444 C5orf67F2Z3F1 127 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 H3BNC9 293 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 K7ENM7 598 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 SLC34A2O95436 690 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 IDEP14735 1019 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 PBX3P40426 434 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 GPM6BQ13491 265 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 ZC2HC1CQ53FD0 456 aaPredicted RBP22.05■■□□□ 1.12
SSBP4-210ENST00000601444 NOMO2Q5JPE7 1267 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 GLB1LQ6UWU2 654 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 FAM178BQ8IXR5 827 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 ZBTB45Q96K62 511 aaPredicted RBP22.05■■□□□ 1.12
SSBP4-210ENST00000601444 GOLPH3LQ9H4A5 285 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 PTPRHQ9HD43 1115 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 MIOSQ9NXC5 875 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 TBC1D7Q9P0N9 293 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 TNFSF13BQ9Y275 285 aa22.05■■□□□ 1.12
SSBP4-210ENST00000601444 NDUFA8P51970 172 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 STRN3Q13033 797 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 ZBTB33Q86T24 672 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 GRAMD1CQ8IYS0 662 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 LRRC43Q8N309 656 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 ZFP42Q96MM3 310 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 GAD1Q99259 594 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 TRIM9Q9C026 710 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 CXCL16Q9H2A7 254 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 ALG13Q9NP73 1137 aaKnown RBP22.04■■□□□ 1.12
SSBP4-210ENST00000601444 PANK4Q9NVE7 773 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 TBC1D13Q9NVG8 400 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 SNTG2Q9NY99 539 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 KLK14Q9P0G3 267 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 TBX20Q9UMR3 447 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 TRANK1O15050 2925 aa22.04■■□□□ 1.12
SSBP4-210ENST00000601444 COL6A3P12111 3177 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 FRMD3A2A2Y4 597 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 ARL5CA6NH57 179 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 ABLIM1O14639 778 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 ACTN4O43707 911 aaKnown RBP22.03■■□□□ 1.12
SSBP4-210ENST00000601444 B4GALT3O60512 393 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 POMCP01189 267 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 MLH1P40692 756 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 AFMP43652 599 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 ZNF280BQ86YH2 543 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 FSIP1Q8NA03 581 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 KLHL23Q8NBE8 558 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 COLGALT1Q8NBJ5 622 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 ADPGKQ9BRR6 497 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 FGFBP2Q9BYJ0 223 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 BLZF1Q9H2G9 400 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 TSHZ2Q9NRE2 1034 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 PARP2Q9UGN5 583 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 RWDD3Q9Y3V2 267 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 MTCH2Q9Y6C9 303 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 COL4A4P53420 1690 aaPredicted RBP22.03■■□□□ 1.12
SSBP4-210ENST00000601444 KIAA1671Q9BY89 1806 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 MYH11P35749 1972 aa22.03■■□□□ 1.12
SSBP4-210ENST00000601444 FAM237AA0A1B0GTK4 181 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms