RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RNF219Q5W0B1 726 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 IQSEC1Q6DN90 963 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 CXorf67Q86X51 503 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 NALCNQ8IZF0 1738 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 DYDC2Q96IM9 177 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 ANO3Q9BYT9 981 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 HAPLN2Q9GZV7 340 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 KIAA1683Q9H0B3 1180 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 TOPORSQ9NS56 1045 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 SYNPO2Q9UMS6 1093 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 VWA7Q9Y334 891 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 LAMC1P11047 1609 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 AHDC1Q5TGY3 1603 aaPredicted RBP4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 ZNF536O15090 1300 aa4.93□□□□□ -1.62
CKS1BP3-201ENST00000600888 PTCH1Q13635 1447 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 OPHN1O60890 802 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 PCDH8O95206 1070 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 MANFP55145 182 aaKnown RBP4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 SESN2P58004 480 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 FAPQ12884 760 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 NFYCQ13952 458 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 RNF151Q2KHN1 245 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 ZNF568Q3ZCX4 644 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 LILRA6Q6PI73 481 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 KLHDC10Q6PID8 442 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 USP30Q70CQ3 517 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 CXorf38Q8TB03 319 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 NKD2Q969F2 451 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 RELTQ969Z4 430 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 FERMT2Q96AC1 680 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 PTPN18Q99952 460 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 NOL10Q9BSC4 688 aaKnown RBP4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 OR10A2Q9H208 303 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 VTA1Q9NP79 307 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 JADE2Q9NQC1 790 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 PPP4R1LQ9P1A2 415 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 MCM8Q9UJA3 840 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 FAM184BQ9ULE4 1060 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 NR2E1Q9Y466 385 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 PPP2R3BQ9Y5P8 575 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 NUMBLQ9Y6R0 609 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 COL16A1Q07092 1604 aaPredicted RBP4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 NHSL1Q5SYE7 1610 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 SHPRHQ149N8 1683 aa4.92□□□□□ -1.62
CKS1BP3-201ENST00000600888 METP08581 1390 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 ANKRD30BQ9BXX2 1392 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 RAB3GAP2Q9H2M9 1393 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 DISP3Q9P2K9 1392 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 A0A0A6YYK5 440 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 ST20-MTHFSA0A0A6YYL1 179 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 ARHGAP6O43182 974 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 FOXD2O60548 495 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 H2AFYO75367 372 aaKnown RBP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 PFKMP08237 780 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 CLEC2LP0C7M8 214 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 ADAM15Q13444 863 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 SLFN13Q68D06 897 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 SPATS2Q86XZ4 545 aaKnown RBP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 GFM2Q969S9 779 aaKnown RBP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 HIST1H2AHQ96KK5 128 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 WDR92Q96MX6 357 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 RBM15Q96T37 977 aaKnown RBP eCLIP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 HIST1H2AJQ99878 128 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 SOX7Q9BT81 388 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 BDH2Q9BUT1 245 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 WNT8AQ9H1J5 351 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 SEC61A2Q9H9S3 476 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 POLR3BQ9NW08 1133 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 TMPRSS11EQ9UL52 423 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 USP18Q9UMW8 372 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 CTDP1Q9Y5B0 961 aaPredicted RBP4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 NRXN1Q9ULB1 1477 aa4.91□□□□□ -1.62
CKS1BP3-201ENST00000600888 TECPR2O15040 1411 aa4.9□□□□□ -1.62
CKS1BP3-201ENST00000600888 ADGRL3Q9HAR2 1447 aa4.9□□□□□ -1.62
CKS1BP3-201ENST00000600888 MYOM2P54296 1465 aa4.9□□□□□ -1.62
CKS1BP3-201ENST00000600888 ANKRD62A6NC57 917 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 C2orf78A6NCI8 922 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 NPEPPSL1A6NEC2 478 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 GOLGA8AA7E2F4 631 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 GOLGA8BA8MQT2 603 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 PRKD3O94806 890 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 ITGB3P05106 788 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 RAC3P60763 192 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 HGFACQ04756 655 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 PLP2Q04941 152 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 CT83Q5H943 113 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 PITRM1Q5JRX3 1037 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 ERICH6BQ5W0A0 696 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 CCDC62Q6P9F0 684 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 GLB1LQ6UWU2 654 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 LIMS2Q7Z4I7 341 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 LYSMD2Q8IV50 215 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 CMIPQ8IY22 773 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 CDYL2Q8N8U2 506 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 COG1Q8WTW3 980 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 RSAD2Q8WXG1 361 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 LPPQ93052 612 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 NEIL1Q96FI4 390 aaPredicted RBP4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 AHCYL2Q96HN2 611 aaKnown RBP4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 LMF1Q96S06 567 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms