RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 PCBP1Q15365 356 aaKnown RBP eCLIP13.91□□□□□ -0.18
ZNF548-210ENST00000600442 KYAT1Q16773 422 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 DCAF17Q5H9S7 520 aaPredicted RBP13.91□□□□□ -0.18
ZNF548-210ENST00000600442 RNF180Q86T96 592 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 RSPH3Q86UC2 560 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 LRRC8AQ8IWT6 810 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 NEK11Q8NG66 645 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 ASAP3Q8TDY4 903 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 BSNDQ8WZ55 320 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 NLRP4Q96MN2 994 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 ERGIC2Q96RQ1 377 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 NAA15Q9BXJ9 866 aaKnown RBP13.91□□□□□ -0.18
ZNF548-210ENST00000600442 EDEM3Q9BZQ6 932 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 INO80BQ9C086 356 aaPredicted RBP13.91□□□□□ -0.18
ZNF548-210ENST00000600442 UPF3AQ9H1J1 476 aaKnown RBP13.91□□□□□ -0.18
ZNF548-210ENST00000600442 PRMT7Q9NVM4 692 aaPredicted RBP13.91□□□□□ -0.18
ZNF548-210ENST00000600442 HSPBP1Q9NZL4 362 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 ZKSCAN5Q9Y2L8 839 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
ZNF548-210ENST00000600442 DAAM1Q9Y4D1 1078 aa13.91□□□□□ -0.18
ZNF548-210ENST00000600442 C17orf102A2RUQ5 167 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 TEX33O43247 280 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 PIGRP01833 764 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 NKX3-2P78367 333 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 KCNH2Q12809 1159 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 CAPSQ13938 189 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 SYCP1Q15431 976 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 FIGNQ5HY92 759 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 CDCA2Q69YH5 1023 aaPredicted RBP13.9□□□□□ -0.18
ZNF548-210ENST00000600442 NFRKBQ6P4R8 1299 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 GBP6Q6ZN66 633 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 ZNF410Q86VK4 478 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 KSR1Q8IVT5 923 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 NME8Q8N427 588 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 LRRC71Q8N4P6 559 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 PANX2Q96RD6 677 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 KIFC3Q9BVG8 833 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 INTS13Q9NVM9 706 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 ZMYM2Q9UBW7 1377 aa13.9□□□□□ -0.18
ZNF548-210ENST00000600442 SMIM35A0A1B0GVV1 85 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
ZNF548-210ENST00000600442 ESPNB1AK53 854 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 INO80B-WBP1J3KQ70 363 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 M0QZ92 97 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 CLDN3O15551 220 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 EXTL3O43909 919 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 TOM1L1O75674 476 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 PRKCBP05771 671 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 SKILP12757 684 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 PBX1P40424 430 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 CLCN3P51790 818 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 VAMP7P51809 220 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 TBX2Q13207 712 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-210ENST00000600442 PRPF4BQ13523 1007 aaKnown RBP13.89□□□□□ -0.19
ZNF548-210ENST00000600442 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 TRAPPC12Q8WVT3 735 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 PRIMPOLQ96LW4 560 aa13.89□□□□□ -0.19
ZNF548-210ENST00000600442 COL25A1Q9BXS0 654 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-210ENST00000600442 GCOM2Q9BZD3 368 aaPredicted RBP13.89□□□□□ -0.19
ZNF548-210ENST00000600442 VCANP13611 3396 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 A0A1W2PQJ5 194 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 ACKR2O00590 384 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 P4HA2O15460 535 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 ERLIN2O94905 339 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 CYP2C9P11712 490 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 GTF2H1P32780 548 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 PTENP60484 403 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 PURAQ00577 322 aaKnown RBP13.88□□□□□ -0.19
ZNF548-210ENST00000600442 BFSP1Q12934 665 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 SURF1Q15526 300 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
ZNF548-210ENST00000600442 EXOC3L4Q17RC7 722 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 MIIPQ5JXC2 388 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 SRGAP1Q7Z6B7 1085 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 TMC2Q8TDI7 906 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 VTI1AQ96AJ9 217 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 MSTO1Q9BUK6 570 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 SENP6Q9GZR1 1112 aaPredicted RBP13.88□□□□□ -0.19
ZNF548-210ENST00000600442 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 SETD4Q9NVD3 440 aa13.88□□□□□ -0.19
ZNF548-210ENST00000600442 DDX20Q9UHI6 824 aaKnown RBP13.88□□□□□ -0.19
ZNF548-210ENST00000600442 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
ZNF548-210ENST00000600442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
ZNF548-210ENST00000600442 MYH9P35579 1960 aaKnown RBP13.87□□□□□ -0.19
ZNF548-210ENST00000600442 HAS3O00219 553 aa13.87□□□□□ -0.19
ZNF548-210ENST00000600442 ADCY6O43306 1168 aa13.87□□□□□ -0.19
ZNF548-210ENST00000600442 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
ZNF548-210ENST00000600442 ZBED6P86452 979 aa13.87□□□□□ -0.19
ZNF548-210ENST00000600442 BEX3Q00994 111 aa13.87□□□□□ -0.19
ZNF548-210ENST00000600442 RBL2Q08999 1139 aa13.87□□□□□ -0.19
ZNF548-210ENST00000600442 FAM187BQ17R55 369 aa13.87□□□□□ -0.19
ZNF548-210ENST00000600442 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms